Rickettsia amblyommatis GAT-30V: MCE_06765
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Entry
MCE_06765 CDS
T01787
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ram
Rickettsia amblyommatis GAT-30V
Pathway
ram03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCE_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ram03400
]
MCE_06765
Enzymes [BR:
ram01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MCE_06765
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MCE_06765
DNA repair and recombination proteins [BR:
ram03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCE_06765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AFC70156
UniProt:
H8K341
LinkDB
All DBs
Position
1177202..1178023
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AA seq
273 aa
AA seq
DB search
MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSPLLATEILNTNILDVRRRAKYL
IIDFNNDYSLIVHLGMSGRFTLQSANYKTQKHDHVIFDLSNGEKLIFNDTRRFGMIYSFK
TDLLEKELFNDLGIEPCSDLLTLEYLKDKLQTKKIPIKNLIMDNRVIVGVGNIYASESLH
LARIHPDKSGSDLRDDEIENLIKSIRDVLTKAITAGGTTLKDFVNGDNKPGYFTQQLKVY
GREGQSCLSCSSTIIKTKHSGRSTFYCKTCQYS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaagtagaaactcttaaaaactctctaaaagataagctaatcgga
cttattatagaaaatgtagagttaaaaagagataatttacgttataagctatccccgctt
ttagctacagaaatcttaaatactaatatactggatgttaggcgtcgtgcaaaatattta
attatagattttaataatgattattctttaatagttcatctaggcatgagcggtagattt
actctgcaatctgctaattataaaactcaaaaacacgatcatgtgatttttgatttaagt
aacggcgaaaagttaattttcaacgatactagacgatttggtatgatttatagttttaag
actgatctcttagaaaaagaattgtttaatgatttaggcatagagccttgttctgattta
ttgacgttagaatatctaaaagataagctacaaactaaaaaaataccgataaaaaacttg
attatggataatagagttatagtcggagtcggtaatatctatgcttccgaaagtcttcat
ttagctagaattcatccggacaaatcaggtagcgatttaagggatgatgaaatagaaaat
ttaattaaatcgattagagatgtgttaactaaagctataactgccggcggtactactctt
aaagattttgtaaacggcgataacaaacctggttattttactcagcaacttaaggtttac
ggtagagagggacaaagttgtttaagctgctctagcactattatcaagacaaaacattca
ggcagaagtactttttattgtaaaacttgccaatatagttaa
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