Rickettsia amblyommatis GAT-30V: MCE_08590
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Entry
MCE_08590 CDS
T01787
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ram
Rickettsia amblyommatis GAT-30V
Brite
KEGG Orthology (KO) [BR:
ram00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ram03400
]
MCE_08590
Enzymes [BR:
ram01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MCE_08590
DNA repair and recombination proteins [BR:
ram03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MCE_08590
Prokaryotic type
MCE_08590
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
ComEC_C
Motif
Other DBs
NCBI-ProteinID:
AFC70437
UniProt:
H8K6C6
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All DBs
Position
pMCE_3:complement(11867..13303)
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AA seq
478 aa
AA seq
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MNKTSIIWLRRNLRLHDNRSFAAALRNSDKILPIFIFDTTILERFKNPHDRRLSFLANTL
CLINDELKKLKGKLLVFHGNPIEIISKLTAILKIENIYADEDYEPSNIARDKTVQELLGS
NCTLNLYCDHLLIKPARVLTKDNKPYKVYTPYMQAFRKFIANNGVIAHNKLLMNYSYNLE
GKLYIPQDIDLKTIDLNVGASEALKQIGYVYKEDELWQPRNAQNILNKFIANRINFYKTD
RDFLYRNGTSTISPYLRFGLISIRECYRKAFNASLNPGTVTWINELIWREFYATILYHFP
NTVNEEFLEKYRNKIPWNNKKEYFNKFINAETGYPIIDAAVKQLISDGWMHNRSRMIVAS
FFTKNLLLDWRKGEEFFAQYLMDYELASNVGGWQWASSCGTDAQPYFRIFNPYTQGQHFD
PDAEYIKKYLPTLKKAQTHIIHNINFYKMYDNYPKPMVDYVLSRAKAIEVFKQDLRYI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacttccataatttggttgcggcgtaatttacgactgcatgataatagatca
tttgcagcagctttgcgtaattctgataaaatcctacctatatttattttcgataccact
attctagaaaggtttaaaaatccacatgacagaaggctttcctttttagcaaacacactt
tgtttaattaacgatgaactcaagaaactaaaaggaaagctgctagtatttcacggcaat
cctatagagattatctccaaacttaccgctattttaaaaattgaaaatatttacgctgat
gaagattatgaaccgagcaatatagcgcgagacaaaacagtacaggagttgttaggtagt
aactgtacgcttaatttatattgcgatcatttacttataaagcctgctagagttttaaca
aaagataataagccttataaagtatatactccttatatgcaggcttttcgcaaatttata
gcgaataatggagttatagcacataataagctattaatgaattatagctataatttagaa
ggtaagttatatataccgcaagatatagatctaaaaactattgacttaaacgtgggggca
tctgaagcattaaaacaaatcggttatgtttataaagaagatgagctttggcagcctaga
aacgctcaaaatattttgaataaatttattgcaaaccgaataaatttttataaaaccgat
cgagatttcttatatcgtaatggcacaagtaccatctcaccttatttaagattcggactt
atatctataagagaatgttaccgcaaggcttttaatgcttccttgaatccagggactgtc
acttggattaatgaactaatttggcgagagttttatgcaactattttatatcattttcca
aacactgttaatgaggaattcttagaaaaatatagaaataaaattccatggaataataaa
aaagagtattttaataaatttattaatgccgaaactggttatcctataatagatgcagca
gttaagcagcttattagtgatggctggatgcataatagatcaagaatgatcgttgctagt
ttcttcactaagaatttgcttttagattggcgcaaaggcgaagagttttttgctcagtat
cttatggattacgaacttgcttctaatgttggtggatggcaatgggcaagctcttgcggt
actgacgcacaaccctatttccgtatttttaacccttatactcaagggcagcactttgat
cctgatgctgaatatataaaaaaatatttacctacattaaaaaaggctcagacacatatt
attcacaacatcaatttttataaaatgtatgataattatccaaagccgatggtggactat
gtattatcacgagcaaaagctattgaagtattcaaacaagacttacgatatatttga
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