Rothia amarae: IDM48_01080
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Entry
IDM48_01080 CDS
T06930
Name
(GenBank) FAD/NAD(P)-binding protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rama
Rothia amarae
Pathway
rama00300
Lysine biosynthesis
rama00470
D-Amino acid metabolism
rama01100
Metabolic pathways
rama01110
Biosynthesis of secondary metabolites
rama01120
Microbial metabolism in diverse environments
rama01230
Biosynthesis of amino acids
Module
rama_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IDM48_01080
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IDM48_01080
Enzymes [BR:
rama01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IDM48_01080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
NAD_binding_9
NAD_binding_8
Pyr_redox_2
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QNV40084
UniProt:
A0A7H2BK88
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All DBs
Position
complement(218998..221706)
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AA seq
902 aa
AA seq
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MTDSVSIAIIGAGPRGLWAVEELSRASLLHHLSFRITVFDPRPLGYGAAYSIDQPNDLVI
NVRSSAVRTALGTLDDFRRDVLDEAEPLNEFPARATVGKFLHASWQNAVENLPSRCTVEF
ERRAVENLAELEGFEHVLLATGHEPALHPRGMLDPFTGLSRVAAGAQVGIRGAALTSIDA
MLALTAGRGGRFTANGYQPSGEEPTRMYPTSRSGRFIQVKPEPVTAAEEVILKKLERKIP
RITSVDELKNLLVQAANAVSGQEFTWDMLAPSSNPADELAQSLANPRRPQQSVGLAWREL
YPAIVRRVSFSDLAESQEFYELTRTLEPFAFGPPAQQVRKVLALVDAGLVDFSFLASTEG
CPADIWVDAVLATPGISPGTLGAQVLHNVASEQAPTDSPVTVKIQPDGMLPGQTRFAFAG
RMSEPFVLGNDSLSRTLHTVIPRWVQTLCALHRDSTAYGLPPLTGRLEPWAEDLFHHPEQ
LQHAIDEYASPLNILNSDPLVRNCRQLTQAGEHHGVDVRIFFARKANKALTFVERVRDEG
HGVDVASYRELSQVLATGMPGERIILSAAIKTDQLLQLAIDNNVTISVDTCAEFDRIIAL
AGDNGVRVAPRLAPDPQRFMPTRFGERSEVWLAYLSQPHPHVQVAGLHLHLHGYSAQDRI
DALHEATDLIEELRAAGHAPEFIDMGGGVPMSYLDDADQWDNFKQALHAQNQGDIAPFTW
KADPLKNFYPFHQGPVREQWLEEVLGSPAGAKVGELGLRLHVEPGRSVLDGCGAIIAKVA
FIKERSDGLPLVGLEMNRTQLRTTSDDYLVDPVHIPLGKAAASEPYEGFLVGAYCIEDEV
IMRRPIFFPQGVQVGDLIAFPNTAGYFMHILESASHQIPLAKNLVAHAGELTLDAIDRGD
IS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcagtttcaatcgccataataggtgccggcccgcgcggattgtgggcggtg
gaggagctcagccgagcaagcctgctgcaccatctcagtttccgcatcactgtttttgat
cctcgaccgctggggtatggcgccgcttactctatagaccagccaaacgatttggtcatc
aacgtacgatcctcagcggttcggactgccctgggtacgctggatgattttcggcgcgat
gttctagatgaggcagagccactcaacgagttccccgcccgcgcgaccgtcgggaaattc
cttcatgcctcgtggcaaaatgctgtagagaacctgccttcacgatgcacggtagagttt
gaacgacgcgcggtagagaatctggcggagctagagggattcgagcacgtcctgcttgcc
accggtcatgaacccgccctccaccctcggggaatgcttgacccattcactgggctttcc
cgcgtcgccgcaggggcacaggtgggtattcgaggcgcagcactgacctccattgatgcg
atgctggctctcactgccgggcgcggcgggcgttttactgccaacgggtatcagccaagc
ggtgaggagccgacccgcatgtaccccacctctcgctcggggcggttcattcaggtcaag
ccagaacccgtcaccgcagcagaggaggtcattctcaagaaattggagcggaaaattccc
cgtatcacttcagtagacgagctgaaaaatctcctcgttcaggcagcgaacgccgtatcg
gggcaagagttcacctgggatatgctcgccccctcaagcaatcccgccgacgaattagcg
caatcgctggcgaaccctcgccgtccccaacagtctgtgggcttggcatggcgagaactc
tacccggcgattgttcggcgagtctctttcagcgaccttgccgagagtcaagaattctat
gagcttacccgtaccctggagcctttcgcttttggtcctcctgctcagcaagtacgcaaa
gttcttgctctggttgatgcgggattggtggatttctcttttcttgcctccaccgagggt
tgcccggcagatatctgggtcgacgccgtcctggcaacacccggaatttcgccagggaca
ctcggggcgcaggtgctccacaatgttgcgtcagagcaagcgcccaccgattcgcccgtc
acggtaaaaatccagcccgacggtatgcttcccgggcaaacccgtttcgcctttgccggg
cgcatgagcgaaccttttgtactgggcaacgattcgctctcacgaaccctgcacaccgtt
attccccgctgggtccaaactctttgcgcgctgcacagggattccacagcctacggactc
cccccactgaccggtagattagaaccgtgggcagaagacctcttccaccaccccgaacag
ctccagcacgccatcgatgaatacgccagcccgctgaatattctcaactccgacccgctg
gtgcgcaactgccgccagctcacccaagcaggagaacaccacggcgtggacgttcgcata
ttcttcgcacgcaaagccaacaaagcactcactttcgtggaacgtgttcgcgatgaaggg
catggagtagatgtagcaagttaccgcgaactatctcaggttctagcaaccggtatgccc
ggcgaacgcatcatcctttccgccgccatcaagaccgatcaattactgcagttagcaatc
gataataacgtgacgatttccgttgatacctgcgcagaatttgaccggattatcgcgctt
gccggtgataatggcgtgcgggttgcaccccgcctagcgccagacccccagcgttttatg
cccacgcgttttggtgagcggtcagaagtttggctcgcctatctctcccagccccatccg
cacgtgcaagtggcaggtttgcatctgcatttacatggttacagcgcccaagatcgcatt
gatgcgctacacgaggcaaccgacctcatcgaagaattgcgcgcagcagggcatgctcct
gagttcatcgatatgggcggtggagtgcccatgagctatctggatgatgccgaccagtgg
gataatttcaagcaggctttgcacgcacaaaaccagggtgatatcgccccctttacctgg
aaagccgacccgctcaagaacttttaccccttccaccagggtcccgtgcgggagcagtgg
ttagaggaggttctcggctcccccgccggtgcaaaagttggcgaattaggcttgcgtttg
cacgtagaaccgggtcgtagcgtgctcgacgggtgcggtgcgattattgccaaagtcgca
ttcatcaaggaacgtagcgacgggttaccgctggtggggctagagatgaaccgcacccag
ctacgcacgacctcggatgactacctcgttgaccccgtgcatatccctctgggaaaggcg
gcggcaagcgaaccctatgaaggtttcctcgtaggtgcttactgcattgaagatgaggtg
attatgcgccgtcctatcttcttcccccagggggtgcaggtaggcgacctgattgctttt
cccaataccgccgggtactttatgcacattcttgagtcagcatcccatcaaattccgctg
gctaaaaacctggtggcacatgccggggagctgacgctcgatgctatcgaccgaggcgac
atcagctaa
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