Rothia amarae: IDM48_02460
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Entry
IDM48_02460 CDS
T06930
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rama
Rothia amarae
Pathway
rama02020
Two-component system
rama02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IDM48_02460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IDM48_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rama03000
]
IDM48_02460
Transcription factors [BR:
rama03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IDM48_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
MarR_2
HTH_24
Crp
HTH_3
Sigma70_r4
HTH_29
TrmB
wHTH-PRTase_assc
HTH_36
HTH_IclR
HTH_26
MarR
HTH_23
YfeC-like
HTH_11
HTH_41
DUF5805
Motif
Other DBs
NCBI-ProteinID:
QNV40316
UniProt:
A0A7H2BKX0
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All DBs
Position
complement(523540..524217)
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AA seq
225 aa
AA seq
DB search
MDLEVLRRAPLFASLDDQAFAALTEDITEVDLSRGANLFYEGDPGDQLYFIVSGKIKLGR
TASDGRENLVAIMGPGEIFGEMALFDPSPRSTSATAVSETRLAAVKHESLRKAMEKSPQI
SAQVLQALARRLRRTNENLADLVFSDVPGRVAKALLDLADRFGRPATDGILVAHELTQEE
LAQLVGASRETVNKALAEFVSRGWIRLEARAVVILDLQRLRNRSR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaagtactgcgtcgcgcacccctctttgcatccctcgacgaccaggcattt
gccgcactaaccgaagacatcaccgaggtcgacctttcacgaggcgctaaccttttttat
gagggcgatcccggagatcagctctacttcatcgtttccggcaagattaagctcggacgc
accgcatcagacggccgcgagaacctcgtagctatcatgggccccggtgaaattttcggt
gagatggctctgttcgacccttcacctcgttccaccagcgcaaccgctgtttctgaaacc
cgtctcgcagccgtcaagcacgaatctttgcgcaaggctatggagaagtcacctcagatt
tctgctcaggttcttcaggctttggctcgtcgtttgcgccgcaccaacgagaaccttgca
gacttggtcttctccgacgttcccggtcgcgttgctaaagctctgctggatttggcagac
cgctttggccgccccgctaccgacggcatcttggtagctcacgagctgactcaggaagag
ctggctcagttggttggcgcttcacgcgagaccgtgaacaaggcgctggctgaatttgtg
tcccgcggctggattcgtttggaagcacgcgcggtggtcattcttgacctgcagcgtcta
cgcaaccgctcacgctaa
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