Rothia amarae: IDM48_02585
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Entry
IDM48_02585 CDS
T06930
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rama
Rothia amarae
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rama03032
]
IDM48_02585 (topA)
03400 DNA repair and recombination proteins [BR:
rama03400
]
IDM48_02585 (topA)
Enzymes [BR:
rama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IDM48_02585 (topA)
DNA replication proteins [BR:
rama03032
]
Prokaryotic type
DNA Topoisomerases
IDM48_02585 (topA)
DNA repair and recombination proteins [BR:
rama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IDM48_02585 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNV40338
UniProt:
A0A7H2BKZ2
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All DBs
Position
546889..549726
Genome browser
AA seq
945 aa
AA seq
DB search
MPTTAKATANHGKSLLIVESPSKVKTISGYLGDAFEVESSMGHIRDLPQPSELPEELKKS
PVGKFAVDLEDNFEPYYQVNPDKKKKVTELKRKLKEADALYLATDGDREGEAIAWHLLQV
LKPKVPVYRLTFPEITREAVERAFGELRDIDQDLVDAQETRRVLDRLYGYELSPVLWRKV
SRGLSAGRVQSVATRLVVERERERMAFRSANYWDLTGTFSTAKQEEFTAKLSAIDGARVA
TGKDFGDDGVLKAASKAKVAHLDEANAHSLAEALKDSTFAVRSVETKPYTRRPAAPFTTS
TLQQEAARKLRFSSRSTMQVAQRLYENGYITYMRTDSVALSTQAINAARTQANELYGAEF
VPSSPRNYASKSKNAQEAHEAIRPAGDSFRTPSQVKSALSPDEFRLYELIWKRTVASQMA
DAKGSTASIKLGAQASDGRDAEFSASGTVITFRGFLAAYEEGRDATRAESKTEEVKGEKR
LPQLAEKDALSASDIQAVGHDTTAPPRYTEASLVKALDELGIGRPSTYAATISTIMDRGY
VNNRSGSLVPSWTAFSVVRLLEEHFNRYVDYEFTAAMEEDLDRIARGEENRPHWLGEFYF
GGEDKKGLKPIVDNLGDIDARAINSIEIADGITLRVGKFGPYLEMGGEINTETGEITDPI
RANVPSDMAPDELTAEKAAELIEKGKSDGRELGVDPETGRTIVARDGRYGPYVTEVIPEM
SEEDIQKWMDEQPTEYYKNGRAKPKKKPKPEKPRTGSLFKSMDLATVTLEDALKLMNLPR
VLGQDEEGNDITVQNGRFGPYLKKGTDSRSLGSEEEIFTITLEQAKEIYSQPKQRGRGTA
KPPLAELGVDPVSEKKIVIKDGRFGPYITDGVTNITVPRSETIESVTHERAVELLAEKRA
KGPVKRKTTAKKAPAKKAPAKKTATKKPAAKKAPAKKAPAKKTAE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaccactgccaaggccactgcaaaccacggtaaatccctactcatcgtagagtcg
ccgtctaaggtgaagactattagcggctacctcggtgatgcctttgaggttgaatcctca
atgggtcatatccgcgatcttccccagccctcagaattacctgaagagttgaagaagtcg
ccggtgggcaagtttgcggttgatttggaagataactttgaaccctactatcaggtgaat
cctgataaaaagaagaaagttaccgaactgaagcgcaagctgaaagaggcagacgccctc
tatctggcaaccgatggggaccgcgaaggcgaagctattgcgtggcatcttttgcaggtg
ctcaagcccaaggttcctgtgtatcgtttgacgttcccagaaattactcgtgaagctgta
gagcgtgctttcggtgaattacgtgatatcgatcaggacttagtggacgcgcaggaaacc
cgccgtgtgcttgatcgtctctatggatatgagctttcaccagtgctgtggcgtaaggta
tcccgcggtctttcggcaggtcgtgtacagtctgttgcaactcgtttggtggttgagcgc
gagcgcgagcgtatggctttccgatcggctaattactgggatttgaccggtacattctct
acggcaaagcaggaagaattcaccgctaaactctcggcgatagacggcgctcgcgtggca
acgggtaaggattttggcgacgacggcgtgcttaaggcggcgtccaaagctaaggtggct
catctcgatgaggcgaatgcgcactctcttgcagaggctctgaaggattcgacttttgcc
gttcgctcggttgaaaccaagccttatacccgccgtccagcggctccttttaccacttct
actttgcaacaggaagctgctcgcaagctacgtttttcttcccgttctacgatgcaggta
gctcagcgcctgtatgaaaacggctatatcacctatatgcgtaccgactcggtggcgctc
tctacccaggcgattaatgcggctcgtacacaggcgaatgagctgtacggtgctgaattt
gtgccgagttcacctcgcaactatgcatcgaagtcgaaaaatgctcaggaagcccacgaa
gcaatccgccccgcaggtgattccttccgcactccgagccaggtgaagagcgcgctgagc
cctgatgagttccgtctctacgagcttatttggaagcgcaccgttgcatcccaaatggca
gatgccaagggttcgaccgcttctatcaaactgggtgcccaggcatccgatggtcgcgac
gccgaattctcagcgtccggcaccgtgatcaccttccgaggtttccttgcagcttatgaa
gaaggacgcgacgccactcgggcagaatccaaaaccgaagaggtaaagggtgagaagcgc
cttcctcagctggcagaaaaggatgccctgagcgcatccgatattcaggctgtagggcat
gacactacagcacctcctcgctacaccgaagcttctttggtgaaggcactcgacgagctt
gggattggtcgcccctcgacctatgcagccacgatttctaccatcatggatcgcggttac
gtcaacaaccgctcaggttcgctggttccttcctggacggcgttctctgtggttcgcctg
ctcgaagagcacttcaaccgctatgtagactacgaattcaccgcagcgatggaagaagac
ctcgaccgtattgcccggggcgaggaaaatcgtcctcattggctgggggagttctacttt
ggtggagaagacaaaaagggtctcaagcctatcgtcgataacttgggagatattgacgcg
cgtgccattaactccattgagatcgcagacggcattaccctgcgcgtaggcaaattcggc
ccttaccttgaaatgggcggcgaaattaatactgagaccggtgaaattaccgatcccatc
cgcgctaacgttccatccgatatggctcccgatgaactcaccgctgaaaaagcagctgaa
ctcatcgaaaagggtaaatcagacgggcgggagctcggtgtagacccggagaccggccga
actatcgtcgccagggatggccgatacggcccgtacgtcaccgaagtaatccccgagatg
agcgaagaagacatccagaagtggatggatgagcagcccaccgagtactacaagaacggg
cgggctaaaccgaagaagaagcccaagcctgaaaagccccgcacaggttcactgttcaag
tcgatggaccttgccacggtaactctggaagatgctctcaagttgatgaaccttccccgc
gttctggggcaggacgaagagggcaacgatattaccgtgcagaacggtcgttttggtcct
tacctgaaaaagggcaccgattcgcgttcgctgggttctgaagaagagattttcactatc
acgttggagcaggcgaaagaaatttattctcagcctaaacagcgtggtcgtggcactgct
aagccacctctggctgagctgggcgttgacccggtttctgagaaaaagatcgtgattaag
gacggccgctttggtccctacatcaccgacggcgtcaccaacattacggttccccgcagc
gaaactatagagtcggtaacgcacgaacgcgcggtagagcttctggcagaaaaacgtgct
aagggtccggtcaaacgcaaaacgacagcaaagaaagcccctgccaagaaggctccagct
aagaagacagcaacaaagaaacccgctgccaaaaaggcgccggcgaaaaaagctccggcg
aagaaaactgctgaataa
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