Rothia amarae: IDM48_03245
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Entry
IDM48_03245 CDS
T06930
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rama
Rothia amarae
Pathway
rama03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IDM48_03245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rama03021
]
IDM48_03245
03400 DNA repair and recombination proteins [BR:
rama03400
]
IDM48_03245
Enzymes [BR:
rama01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IDM48_03245
Transcription machinery [BR:
rama03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IDM48_03245
DNA repair and recombination proteins [BR:
rama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IDM48_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QNV40445
UniProt:
A0A7H2BL99
LinkDB
All DBs
Position
681941..682933
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AA seq
330 aa
AA seq
DB search
MLIAQRPTLSEEVVAENRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVEGVTEDVTEIILNLKQLSISSENDEPVVAYLRKQGEGELTAADIEVPAGVEIHN
QDLHIAHLNSRANFDAELTIERGRGYVSAAQNKSGDSEVGRIPVDSIYSPVLKVTFRVNA
TRVEQRTDFDSLTLDVETKEAIAPRDAVASAGSTLVELFGLARELNTAAEGIEVGPSPAD
ESMAADLALPIEDLEMSVRSYNCLKREGIHTVGELVARSEADLMDIRNFGAKSIDEVKAK
LTELGLALKDSPPGFELARMHDDEDGYGDI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgccccactttgagtgaagaagtagtagcggaaaaccgctctcgc
ttcaccatcgagcccctcgaaccgggcttcggctacaccctgggtaactcgcttcgtcga
accctgctctcatcaatccccggtgccgctgtaaccagcattcgcatcgatggcgtgctg
catgaatttagcaccgttgagggcgttaccgaagatgtcactgaaatcatcttgaatctc
aagcagctttcaatttcatctgagaacgatgaacctgttgttgcatacctgcgcaagcag
ggtgaaggtgaactcaccgcagcagacatcgaggttcccgcaggtgtggagatccacaac
caggatttgcacattgcgcacctgaactcacgagcaaacttcgacgctgagctgactatt
gagcgtggtcgcggctacgtttcagcagctcagaacaagagcggagatagcgaagttggc
cgtatcccggttgactccatttactcacccgttctgaaggttacattccgtgtgaatgca
actcgtgtggagcagcgcactgacttcgactcccttactttggacgtcgaaaccaaggaa
gctattgctcctcgcgatgcagtcgcatcggcaggtagcaccctggttgagctgttcggc
ttggcacgcgaactcaataccgcagctgaaggtattgaggttggtccgtcacctgctgac
gaatcaatggctgctgatcttgctcttccgattgaagatctcgaaatgtcagtacgttcc
tacaactgccttaagcgtgagggcatccacaccgtgggtgagctcgttgcacgcagtgaa
gcggatcttatggatattcgtaacttcggtgcaaagtctatcgatgaggtcaaggcgaag
cttaccgagcttggtctagcactcaaggattcacctcccggttttgaacttgctcgtatg
cacgatgacgaagacggctacggagatatctaa
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