Rothia amarae: IDM48_04905
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Entry
IDM48_04905 CDS
T06930
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rama
Rothia amarae
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rama03400
]
IDM48_04905 (sbcD)
DNA repair and recombination proteins [BR:
rama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IDM48_04905 (sbcD)
Archaeal homologous recombinant proteins
IDM48_04905 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QNV40737
UniProt:
A0A7H2BM41
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All DBs
Position
1014797..1015948
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AA seq
383 aa
AA seq
DB search
MRILHTSDWHLGRSFHGLSLHDISEKFLMELVETVKEKNIDAVLVSGDVYDQAQPRTETI
ELLSATLEELSELGCAVVLSSGNHDSAARLGFASKLLARQRVFFQTEVEQSNEPVLLEKG
GVSVAIFAAPYLEPRSMGRRLGVAPTHRDVLEHTFNAARQRKEELPQDTVSIAMAHCFAS
GSQPTESERNIAVGGIETVDFQVFRDFDYVALGHIHGKQKLTDTIRYSGSPLAFSFSEEN
HRKGAWLLDIETEGIVEISEVIWKNKLSLKTLRGTLAELCTEKTYTPFEQSICRIYITDD
VRPLGALEKLRERFETVAELYFDPAHPAQRDTRAYAQRVSQTMNIEEVCTDFFGHVRGSE
LTPDEVSYVHDVCTAVEAEEVSA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttgcacacctctgattggcacctgggcagatcttttcatgggctgtctctg
catgacatcagcgagaagttcttgatggagttagtagaaaccgtgaaagagaaaaatatc
gatgcggtcttggtgagcggtgatgtttatgatcaggcgcaaccgcgtaccgaaaccatt
gaattgctttccgcaacccttgaagaattgagcgagctggggtgcgcggtggtgctcagt
agcggcaaccatgattcggctgcgcggctaggctttgcctctaaactcctggcgcggcag
cgggtattttttcaaacagaggtggagcaaagtaacgagcccgtgcttctcgaaaaaggc
ggggtaagcgttgcaatttttgccgctccctatcttgaaccgcggtcaatgggcagacgg
cttggcgtcgcccctactcaccgcgatgtcctagaacataccttcaacgctgcccggcag
cgcaaggaagagttgccgcaggataccgttagcatcgctatggctcattgctttgccagc
ggatctcaaccgaccgaatcggaacgaaatatcgccgtcggaggtattgagaccgtagat
tttcaggtgttcagggattttgactacgttgctctaggccatattcatggtaagcaaaag
ctaaccgatactatccgttactccggctcacctttggctttctctttctctgaggaaaac
caccgcaagggcgcttggctactcgatattgagaccgagggcatcgtagagatttctgaa
gttatctggaaaaacaagctttctctgaaaacgctgcggggtacgttggctgagctatgc
acggagaagacctacaccccctttgagcaatccatttgtcggatttatatcactgacgac
gtgcgacctttaggtgctctcgaaaaacttcgggaacggtttgagacggtagcggaacta
tattttgatccggcgcatccagcacagagagatacccgcgcctatgcgcagcgagtttcg
cagaccatgaatatcgaagaagtctgtactgactttttcggacacgttcgcggtagcgaa
ctcacacccgatgaagtgtcctatgtgcacgacgtgtgcacggctgtagaagcagaggaa
gtttccgcatga
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