Rothia amarae: IDM48_05200
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Entry
IDM48_05200 CDS
T06930
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rama
Rothia amarae
Pathway
rama03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IDM48_05200 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rama03019
]
IDM48_05200 (rnc)
03009 Ribosome biogenesis [BR:
rama03009
]
IDM48_05200 (rnc)
03036 Chromosome and associated proteins [BR:
rama03036
]
IDM48_05200 (rnc)
Enzymes [BR:
rama01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IDM48_05200 (rnc)
Messenger RNA biogenesis [BR:
rama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IDM48_05200 (rnc)
Ribosome biogenesis [BR:
rama03009
]
Eukaryotic type
90S particles
RNase
IDM48_05200 (rnc)
Prokaryotic type
rRNA processing factors
IDM48_05200 (rnc)
Chromosome and associated proteins [BR:
rama03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IDM48_05200 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QNV40788
UniProt:
A0A7H2BM92
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All DBs
Position
1076628..1077314
Genome browser
AA seq
228 aa
AA seq
DB search
MKNSDSSDLLKRLGVDLDTETFQHALTHSSYSFEHPGAPNNERLEFLGDSVLSLAIAEEV
YRLFPELPEGELVKKHHVVVSSWALAKIARSLDVGPHIRLGKGERKTGGQDKDSILADTM
EAIFGACYLQCGRETARDLVLRLVAPLLCDEEILDAGRDWKTELQEIVQNRKLGSLVYTI
ERSGAEHSPIYTATAVIDGERFEQSTGSASNKKEAERQAARATCKVLV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactctgattcatcagatttgttgaaacgtctcggtgtcgatctcgacaccgag
acgtttcagcatgcgctgacccacagttcctattcatttgagcaccccggcgctcccaat
aacgaacgcctggaattccttggagattctgtgctttcgctggcgattgccgaagaagtg
taccgactttttcctgagctgcctgaaggcgaattggtcaagaaacaccatgtggttgtt
tcgtcgtgggcgctggctaagattgctcgttcactcgacgtcggccctcatattcggttg
ggcaaaggcgagagaaaaacaggtgggcaagataaagattccattttggcggacactatg
gaagcaatttttggtgcctgctatcttcaatgcggccgggaaactgcccgcgatttagta
ctccgcctggtggcgcccctgctgtgtgatgaagaaattcttgacgctggccgcgactgg
aaaaccgagttacaggaaattgttcagaaccgaaaattgggtagcctggtgtacaccatt
gagcgcagtggcgctgaacactcaccaatttataccgctactgccgtgattgatggagag
cgatttgaacagagcaccggttctgcctccaacaagaaagaggcagaacggcaggctgct
cgggcaacctgcaaagttcttgtctaa
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