KEGG   Rothia amarae: IDM48_05420
Entry
IDM48_05420       CDS       T06930                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
rama  Rothia amarae
Pathway
rama03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rama00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    IDM48_05420 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rama03019]
    IDM48_05420 (orn)
   03009 Ribosome biogenesis [BR:rama03009]
    IDM48_05420 (orn)
Messenger RNA biogenesis [BR:rama03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IDM48_05420 (orn)
Ribosome biogenesis [BR:rama03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    IDM48_05420 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like SGBP_BT4661-like
Other DBs
NCBI-ProteinID: QNV40826
UniProt: A0A7H2BMD0
LinkDB
Position
complement(1123974..1124594)
AA seq 206 aa
MSISNERIVWIDCEMTGLSLENDALIEVAALVTDAELNILGQGVDVIIKPDPAALENMDD
FVTNMHKTSGLLDELEQGISMGDAERQVLDYIQEFVPEPRKAQLAGNSIGTDKTFLSRDM
PELIDYLHYRVIDVSTIKELSRRWFPKAHYNAPAKTGNHRALGDIRDSIDELRYYREAVF
VPAPGPDSKAASAIAQKVQNSRQELS
NT seq 621 nt   +upstreamnt  +downstreamnt
gtgtctatttctaatgaacgaattgtatggattgactgcgagatgacagggctctctttg
gagaacgatgctctgattgaagtcgcagcacttgtgaccgatgcagaactcaacatattg
ggtcaaggtgtagatgtcattatcaagcctgatcctgctgcgctggagaacatggatgat
tttgtaacgaacatgcataagacatctggtctactcgatgaactagaacagggaatctca
atgggagacgccgagcgtcaggtgctcgactatattcaggagtttgtacccgagccgcgc
aaggcacaacttgcgggaaattcaatcggcacagacaagactttcctcagccgggatatg
cctgaactgattgattaccttcactaccgcgtcattgatgtttcaaccattaaggaactt
tcccgccgttggttccccaaagctcactacaatgccccggccaagactggaaaccatcgc
gcccttggagatattcgggattcgattgatgaacttcgttactatcgcgaagccgttttt
gtgccggcaccagggcctgattccaaggcagcctctgcaatcgcacaaaaggtgcagaac
agcaggcaggagctaagctaa

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