Rothia amarae: IDM48_06260
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Entry
IDM48_06260 CDS
T06930
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rama
Rothia amarae
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rama03051
]
IDM48_06260 (pafA)
Enzymes [BR:
rama01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
IDM48_06260 (pafA)
Proteasome [BR:
rama03051
]
Prokaryotic proteasome
Bacterial regulatory particles
IDM48_06260 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QNV39033
UniProt:
A0A7H2BH87
LinkDB
All DBs
Position
complement(1306943..1308382)
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AA seq
479 aa
AA seq
DB search
MKKRIFGIETEFGITYVPSSLGPIGPEEAARILFKPVVESWRSTNVFLPNGSRLYLDVGS
HPEYATAESATLRDLIAQDKAGELLFADLLNQAQDSIEAEGKEGTFYLFKNNVDSAGNSF
GSHENYMLERRVEFSKLVRSLIPFLMTRQIMVGAGKTHPHGPEAWRPLTGQDKKHGTPSF
SFSQRADYIWEDASTATTRSRPLINTRDEPHADPNQYRRMHVINGDSNMSETTTLLKIGA
TDIILRMLEDHFPLENFEIKDTANALRTVSHDLTGTTRFELADGSYKNALELQRNYLRAA
QKYIADAGAHHADVPYILDLWNRALIAVETQDISGIDTEIDWAIKKKLLDSYIARGAKDY
ADSRIQQLDLAYHSIDPDRGVFNVLQKAGRARRVIDPGAVEKATLQPPETRAKIRGSFIQ
AAHRAGEPTTVDWVHLRLNNKPQLNAVCKDPFATEDSTVKQLIDLLGAQKTQEWMPPFI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagagaatttttggtattgaaactgaatttggtattacctacgtaccctcttca
ttaggtccgattggtcctgaagaagcagctcgtatcttattcaagcccgtggtggagtca
tggcgttcaacaaacgtttttctccccaacggttcccgcctgtacctggatgtcgggtct
catcccgaatacgccaccgctgaatcggcaacattacgtgatctcattgcccaagataag
gcgggggagctactttttgcggatttactgaaccaagcccaagacagcatcgaagcggag
ggcaaagagggaactttctacctgtttaaaaataatgttgattcagcggggaactcattc
ggatcccacgagaattacatgcttgaacggcgagtggaattttcaaagctcgtccgttcc
ctcatcccttttttgatgactcgccagatcatggtgggagcaggtaaaacgcatccgcac
ggccccgaagcatggagacctctcaccgggcaggataaaaaacacggtacgccaagtttc
tcattttcccaaagggcggattacatctgggaggacgcctctactgcaactactcgatct
cgtccacttatcaatacccgcgatgagccacacgccgaccccaaccaatatcgccggatg
cacgtcatcaacggtgattccaatatgtctgagacaaccaccctcctaaaaattggcgca
acagacattatccttcgcatgctggaagatcattttccactggaaaacttcgaaataaag
gacacagcgaatgccctgcgcacggtgtcgcacgatctcacaggcactacacgatttgag
ttggcagatggctcctacaagaatgctctggagttgcaacgcaactatttgcgagcagct
cagaagtatatagctgatgcaggtgcacaccatgcagatgttccttatattttggattta
tggaacagagctttgattgcggtggaaacacaggacatttcgggtatcgataccgaaatt
gactgggctatcaagaaaaaacttttagattcttatatagcgcgtggtgctaaagattat
gcggattctcgaatccagcaactagatttggcttatcacagcatcgaccctgaccgcggc
gtctttaacgtgctacaaaaagcagggcgtgcccgtcgtgtgattgaccccggtgctgtt
gaaaaagctacgttgcaaccacctgaaactagagcgaaaattcgaggtagttttattcag
gccgcacatagggcaggagaacccaccaccgttgactgggtacatttaaggctcaacaac
aaacctcaattgaacgcagtatgtaaggatccgttcgctaccgaggactcgacggtcaag
cagttaattgatctgctgggagctcaaaaaacgcaggaatggatgccgcctttcatctaa
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