Rothia amarae: IDM48_06985
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Entry
IDM48_06985 CDS
T06930
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rama
Rothia amarae
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rama03032
]
IDM48_06985
03400 DNA repair and recombination proteins [BR:
rama03400
]
IDM48_06985
Enzymes [BR:
rama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IDM48_06985
DNA replication proteins [BR:
rama03032
]
Prokaryotic type
DNA Topoisomerases
IDM48_06985
DNA repair and recombination proteins [BR:
rama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IDM48_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4600
Inp1
PCI
Motif
Other DBs
NCBI-ProteinID:
QNV39163
UniProt:
A0A7H2BHL7
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All DBs
Position
1464677..1467298
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AA seq
873 aa
AA seq
DB search
MARRSKTFQDDYPTDVVENIVDIDVSSEMETSFLEYSYSVIYSRALPDARDGLKPVQRRI
LYMMQQMGLRPDKGHVKSARVVGEVMGKLHPHGDSAIYDAMVRLAQPFAMRMPLVDGHGN
FGSLDDGPAASRYTEARMDPAALALTADLDEDVVDFVPNYDNQFMQPAVLPAAFPNLLVN
GSSGIAVGMATNMPPHNLREVIAGAQHLLANPDASLKDIMKFIPGPDLPSGGTIVGLQGI
KDAYENGRGIFKTRATASIEQVSARKQGIVITELPYMVGPEKVIEKIKDGVNKKKLVGIS
DVTDLTDRKHGLRMVIELKNGFNPQAVLASLYKFTPLEDSFGINNVALVDGQPHTLGLLD
LLRVYVNHRVEVVRRRTAFRLKKRQDRLHLVEGLLVAIVDIDEVIQIIRSSDETAQARER
LMTIYDLTEVQANHILELRLRQLTKYSRIELEKEQEELQAEISELESILAQESKLHRLVS
DELQQVADLYGTDRRTKLTQRDDLEKAVLAAAPDAPKSKKLGLALEIADDPCWAVLSASG
MMGRTNSIRTQLQALPDPAKRVKHDALLSLVPTTARGEIGAVTSAGRMIRVNVMDLVVLE
ESNGAPLLNSGVKATEAITLARGETLVGIAPLNQIIALATEHGLIKRVNPEYPLNADEWE
IIKLKPRDRVVAVHQCASNDLNLTLVTEQAKLLTFDAAKVRPQGRLGGGIAGIKLAENDR
VIALGVTAPGAPAQVVTITDGSAEDGAAASAKVTELSEFPAKGRATGGVRAHRFLAGETK
LSVAFVGVGPARATTAAGVARSLPTEFGVRDGSGVSLNQSIALIGPSFEETRYLLGALGS
RQEKVKSPGAPAETSDQPEAESTAVAESMDPLF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgctccaagacatttcaggatgattaccccaccgatgtcgtcgaaaatatc
gtagatatcgatgtttcttctgaaatggaaaccagcttcctggagtactcatactcagtg
atttactctcgcgcgttgcccgatgcccgtgatggtctgaaaccggttcaacgccgcatc
ctctatatgatgcagcaaatgggtttacgccctgacaaggggcatgtgaaatctgcccgc
gtggtcggggaagtcatgggtaaactccacccccatggcgattcagcgatttacgatgcg
atggtgcgccttgctcaaccctttgctatgcgcatgcccctggtagatgggcatggcaat
ttcgggtctctcgatgacggtccggcggcgtctcgctacactgaagctcggatggatccc
gcagctcttgccttgacggcggatctcgacgaggacgtcgtcgattttgtacctaactat
gacaatcaattcatgcaacctgcggttcttcccgcagccttccccaaccttttggtgaat
gggtcctcaggtatcgctgtgggtatggcgaccaatatgccgccgcacaatttacgggag
gttatcgccggtgctcaacatctgcttgcgaatcccgatgcctctctcaaagacatcatg
aagttcatccccggtcccgatttaccctccggaggtacaatcgtaggtttgcagggtatc
aaagatgcctacgagaacggtcggggtattttcaaaactcgtgccacagcgtccattgag
caggtttcagcgcgaaaacagggcattgtaattaccgagctaccttacatggtgggtccg
gaaaaggtcatcgaaaaaataaaggatggcgtcaacaagaagaagctggtaggcatctca
gacgttactgatttgacggaccgcaaacacggtttgcgcatggtaattgaactcaaaaac
gggttcaacccgcaagctgttcttgcatcgctctataagttcaccccgcttgaagactca
ttcggtatcaacaatgtggcactcgttgatgggcagcctcacactctcggtctgctggat
ttgctgcgggtctacgtcaaccaccgcgttgaggttgtacgccgtcgtaccgctttccgc
ctgaaaaaacgccaggaccgtttgcatctggtggagggtctgttagttgcgattgtagat
attgacgaggttatccaaatcattcgctcctcggacgagactgctcaggctcgcgaacgc
ttgatgactatctacgatctgaccgaggttcaggcgaaccatattctggagcttcgcctc
cgccagctcaccaagtattcgcgaattgagttagagaaagagcaagaagaacttcaagcg
gagatttccgagttagagtcaattctggcgcaggaatctaaattgcaccggttggtttca
gacgaattgcagcaggttgccgatttgtatggcaccgatcgacggaccaagctaacgcag
cgagacgatttggagaaagccgttttggcagcggctcccgatgcgccgaagagtaagaag
ttgggtttggcgctcgaaatcgctgacgatccgtgctgggcggtgctctcagcatcaggc
atgatggggcgcaccaactcaatccgaactcaattacaggccttgcccgatcccgctaag
cgagtgaagcatgacgcgctcctctctcttgtaccgaccaccgctcgtggagaaattggt
gcagttacttctgccggacgcatgattcgtgtgaatgttatggatttggtggtgctggaa
gagagcaatggcgctcccctgctgaattccggagtgaaagcaacagaggcaattacacta
gcgcgaggtgaaacgctggtggggattgctccgctgaatcagattattgctctagcaacc
gagcacggtctaattaagagagtgaatcccgaatacccgctcaacgccgatgagtgggaa
attatcaagctcaagccccgagatcgtgtggtagcggtgcatcagtgcgcttctaacgat
ttgaatctcaccctggtcaccgagcaggcgaagttgctgactttcgatgccgccaaggtc
cgaccccagggcagattgggaggaggcattgcgggcatcaagttggcagagaacgaccga
gtcattgccttaggcgttacggcccccggtgctcccgctcaggtggtgaccataacggat
ggttcggcagaggacggcgctgctgcctccgcgaaggtaaccgaactcagcgaattccct
gccaagggacgcgctaccggtggtgtacgagcgcatcggttcttagcgggggagacaaaa
ctttccgtagcctttgtgggagttggtcctgctcgcgccaccactgccgccggggttgct
cgttcattgcccaccgagtttggggtgcgagacggctcaggagtttcactgaaccaatcg
attgctttgatcggccccagttttgaagaaactcgctacttgctaggtgcattgggatcc
cgtcaagaaaaagtaaagtctcctggtgccccggcggaaacttccgaccagccagaggct
gagtcaactgccgtagctgagtctatggacccgctcttctaa
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