Rothia amarae: IDM48_07990
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Entry
IDM48_07990 CDS
T06930
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rama
Rothia amarae
Pathway
rama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IDM48_07990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rama03019
]
IDM48_07990
03016 Transfer RNA biogenesis [BR:
rama03016
]
IDM48_07990
Enzymes [BR:
rama01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IDM48_07990
Messenger RNA biogenesis [BR:
rama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IDM48_07990
Transfer RNA biogenesis [BR:
rama03016
]
Prokaryotic type
tRNA degradation factors
IDM48_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
PCB_OB
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QNV39336
UniProt:
A0A7H2BI40
LinkDB
All DBs
Position
complement(1700312..1702549)
Genome browser
AA seq
745 aa
AA seq
DB search
MEGPEIKFAEAIIDNGKFGQRTVRFETGRLAQQAAGSALVTIDDETTLLSATAVGKNPRE
GFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTEAVLAARLIDRPLRPAFKKGIRNEVQ
VVVTVLTIEPDEIYNTVAINAASCSTALSGLPFAGPVGGVRIALIDGQWVCFPKFSQLAE
ATFDMAVAGRIVTKADGTEDVAIMMVEAEATDNSWKLIKEQGKQAPTEEIVSEGLEAAKP
FIKALCEAQLALKAEAGKEPMVLPTFGSHGDDVDAAVREFASEKIADVYSIAGKQEREEA
SGMLQQEVLAALGSEGKEFEGREDEINAAFNALTKHTVRQRILTEQVRIDGRGLTDIRQL
TAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKLEQQLDSLYPVKSKRYIHHYNFPPYSV
GEPGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCAST
LSMLNAGVPLRAPVAGIAMGLVSDEVDGEIRYAALTDILGAEDALGDMDFKVAGTSEFVT
AIQLDTKLDGIPASVLAAALTQAREARLHILEVLNAAIDAPDEMSNFAPRVISVSVPVSK
IGEVIGPKGKMINQIQEDTGTDISIEDDGTVYIGAVDGPSADAARAAINAIANPQVPEVG
ERYLGTVVKTTTFGAFVSLTPGKDGLLHVTELRKLNDGKRVNDVDDVVSIGQKVQVEITK
IDDRGKLSLSPVVAESEESEEDSEA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcccgaaattaaatttgcagaagcaatcattgacaatggaaagttcggtcag
cgcaccgttcgtttcgaaacaggacgcctcgcacagcaggctgcaggttcagctctcgtc
accattgacgatgaaaccaccttgctctccgctaccgcagtgggcaagaatccccgtgaa
ggctttgacttcttccccttgaccgtcgacgttgaagaacgtatgtacgcagcgggtaag
attcctggctctttcttccgccgtgaaggtcgcccctccaccgaagctgttctcgctgcg
cgtctgattgaccgccccttgcgtcctgctttcaaaaagggcatccgcaacgaggttcag
gttgtcgtcaccgttctcaccattgaacccgacgaaatctacaacaccgtagcaattaac
gcagcatcttgctccaccgctctttcaggcctgccctttgccggtcctgtaggcggcgtt
cgcatcgcactgattgacggtcagtgggtctgcttccccaagttctcccagcttgctgag
gcaacttttgatatggctgttgccggacgcatcgtgaccaaggcagacggcactgaagac
gttgccatcatgatggtcgaagctgaagctaccgataactcatggaagctcatcaaggaa
cagggcaagcaggctcccaccgaagaaatcgtctctgaaggtcttgaagctgctaagcca
ttcatcaaggcactgtgcgaagcacagcttgctctcaaggctgaagccggcaaagaacct
atggttctgcctacgttcggctcccacggcgacgacgtcgacgccgcagtgcgcgaattt
gccagcgaaaagattgcagatgtttactccatcgcgggtaagcaggaacgtgaagaagca
tcggggatgcttcagcaggaagttcttgcagctcttggtagcgaaggaaaagaatttgaa
ggtcgcgaagatgaaatcaacgcagctttcaacgctctaaccaagcacaccgttcgccag
cgcatcctcaccgagcaggttcgtattgacggtcgcggtctgaccgacatccggcagctc
accgctgaagttgaggttctgccccgcgttcacggttcagctatcttcgagcgcggcgaa
acccaaattatgggtgttaccaccttgaacatgctcaagctggaacagcagttggattcg
ctgtacccagtcaagtccaagcgctacatccaccactacaacttccctccctactcagta
ggcgagcccggtcgtgttggttcacccaagcgccgcgaaatcggtcacggtgcactagct
gagcgtgcgttggttcccgttcttccttcacgcgaagaattcccctacgccatccgtcag
gtctctgaggcactgggctctaacggctcaacctccatgggctcggtatgcgcatcgacc
ctttctatgctcaatgccggtgttcctttgcgtgcacccgttgcaggtatcgctatgggg
ttggtctctgatgaagttgacggcgaaatccgttacgcagctcttaccgatattctcggt
gcagaagatgctttgggagatatggacttcaaggtcgcaggtacctctgagttcgttacc
gcaatccagcttgatactaagctcgacggcatccccgcatctgttctggcagctgcactg
actcaggcacgtgaggctcgccttcacattcttgaggttcttaacgcagcaattgacgct
cccgatgagatgagcaactttgctcctcgcgtgatttcagtgagcgttcctgtttccaag
attggtgaagtcattggtcctaagggcaagatgattaaccagattcaggaagacactgga
accgatatctccatcgaagatgacggcaccgtttacatcggcgcggtcgacggtccctcc
gctgatgcagcacgtgcagcaatcaacgctattgctaacccccaggttcctgaggtcggc
gagcgttacctgggtaccgtcgtcaagaccacaaccttcggcgcattcgtttccttgact
cctggcaaggacgggctacttcacgtcaccgagttgcgtaagctcaatgacggcaagcga
gtcaacgacgtcgacgacgtcgtttcgattggtcagaaggttcaggttgagatcaccaag
attgatgatcgtggcaagctctcgctatcacctgttgtagctgaatctgaagaatcagaa
gaagactcggaagcgtaa
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