Rothia amarae: IDM48_08040
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Entry
IDM48_08040 CDS
T06930
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rama
Rothia amarae
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rama03016
]
IDM48_08040 (truB)
Enzymes [BR:
rama01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IDM48_08040 (truB)
Transfer RNA biogenesis [BR:
rama03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IDM48_08040 (truB)
Prokaryotic type
IDM48_08040 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QNV39345
UniProt:
A0A7H2BI49
LinkDB
All DBs
Position
complement(1709638..1710663)
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AA seq
341 aa
AA seq
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MTKKQHQGPSGLIVVDKPAGMTSHDVVSRVRRLAQTRKVGHAGTLDPMATGVLILGIGKA
TKLLTWIVEESKTYTATIRLGISTVTDDVEGETLEVAEPKAIASIDDARIQAEVGKLTGD
IMQVPASVSAIKVDGVRSYSRVREGQDVQLDARPVTISEFAVHSIDRTSITTVDAEGASV
DAQVIDLNITVSCSSGTYIRSLARDLGNALGVGGHLTSLRRTRIGEIQVAEAHTLDALAE
LREQEQPLPLFPLEDAAAHLFGVRELSAQDATDISFGRRIEPSTSAHQRATNGGATDGIT
AAYAPNQTLVGLIENKTFRGQPVAAPLLVFEASHTFEENPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaaaaacagcatcaggggccgtccgggctgattgtcgttgataagcctgcgggc
atgacgagccatgacgtggtttcgcgtgtgcgcaggcttgcccagacgcgcaaagtgggg
cacgccggcactcttgatccgatggcgaccggagtgctgattttgggcattgggaaagct
actaagttactcacgtggattgtggaggagtcaaagacgtataccgctactatccgcttg
ggcatttcaaccgtcaccgacgacgtcgagggcgaaactcttgaggtcgctgaacccaaa
gcgattgcatctatcgatgatgcgcggatacaggcggaagtgggaaagctcaccggcgat
atcatgcaggttcctgcgtcggtttccgctatcaaagtggacggcgttcgttcttattct
cgcgttcgtgaggggcaagacgtacaactggacgctcgtccggtgaccattagtgagttc
gccgtacattctattgaccggacctcaattactacggtggacgctgaaggtgcttcggtt
gatgctcaggtgattgacctgaatatcacggtttcctgttcttctggcacctatatccgc
tcccttgcccgagatttagggaatgccttgggggtaggcggacatttgacctccttgcgc
cgtactcgcattggcgaaatccaagtagccgaggctcatacgttggatgctctggcagag
ctgagggaacaggaacagcctctgccgttgtttcctttagaagacgccgcagcccatctg
tttggcgtcagggagttgagtgctcaagatgccacggatatttctttcggacgccgcatt
gagccctctacttctgcacaccagcgggcgacgaacgggggagcgacagatggcattaca
gccgcttatgctcccaaccagactctcgtcgggcttatagaaaataagaccttccgcgga
caacccgttgccgcaccgttactggtttttgaagcaagccatacgtttgaggagaacccc
gcatga
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