KEGG   Rothia amarae: IDM48_09650
Entry
IDM48_09650       CDS       T06930                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rama  Rothia amarae
Brite
KEGG Orthology (KO) [BR:rama00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rama03400]
    IDM48_09650
Enzymes [BR:rama01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IDM48_09650
    5.6.2.6  RNA 3'-5' helicase
     IDM48_09650
DNA repair and recombination proteins [BR:rama03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IDM48_09650
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C AlkZ-like DUF6406
Other DBs
NCBI-ProteinID: QNV41070
UniProt: A0A7H2BN24
LinkDB
Position
2061034..2065599
AA seq 1521 aa
MVNSDSLLERDGTAPDQHSIPAVDIDHLTRGLTLADAIGIFPQENAPAPQVEITRTEIEE
FDPAELSPAEIAQEATPDTSGYQASIWPHVEERIVDLVEKYRSTIVFANSRGLAEKLTAR
LNEIHADREEARAAMEGSSEDSENASASPRVTSPPQNISEALSQALAANGGARIEREDAK
IKRPPAQIMAQSATAHGVPPLLARAHHGSVSKDQRSVIEEALKSGELRCVVATSSLELGI
DMGAVDLVIQVESPGSVASGLQRVGRAGHQVGEISRGYLYPKHRGDLLNATVTVQRMLAG
NIEPLSIPQNPLDILAQQTVAACALGPIDVESWFEALRHTAPFATLPRSAFEATLDLLSG
KYPSDEFAELRPRVIWDRDAGTLEGRPGAQRVAVTSGGTIPDRGLFPVYIVGSEDSKAPK
RVGELDEEMVYESRAGDVIALGATSWRIEDISHDRVSVTPAPGVPGKLPFWHGEGPGRPV
ELGRALGQFTRELATEIQNEPAAARQRVEAIGLDTWAADNVQAYVREQSEATGAVPSDQQ
FIVERFRDEIGDWRVVLHSPYGMPVHAPWALAVGQRAEDMFGVNASAMAADDGIVLRIPS
IEAEPPGASLFFFDTDELENIVTERVGSSALFASRFRENAARALLLPRRDPGRRTPLWQQ
RQRSAQLLDVARKFSNFPIILETVRECLQDVYDLPVLMDIHRKIDSRAIRVNEIETESPS
PFARTLLFGYVAQFLYEGDSPLAERRAAALTLDPALLSELLGRDELRELLDANVIRQTEA
RLQHSVAGYRYQGIEGAADLLRLLGPLNAHQLAARLRVNRSSEETEEEPLTSEQAEAFAR
ELVSANRALAFTLHGTEHFAAIEDAARLRDGLGVPLPMGVPLAFLEPVPHPLHDLVGRYA
RTHAPFTTAQAAAALGLGTAVVETTLRAMATERRIISGEFLPEEIRAELALARTGTVEAA
GTEWVDAGVLRTLRSRSLAALRADVEPVAQHIYGRFLPPWQHVQSWEITEETFAPGTFGA
PVGGKKVSAKAYEDSMLSGYDGLLTAIDQLAGVRIPASALEPLVLRSRVKDYSPSLLDRA
LSSGDVLWAGDGELAGDGWITLHLTEAASLTLPSDGERQDRLSELSPLDRAVYEVLGGGG
LFFQQVREALSRYAAEALQAVEPSANPTESGAGHPENMPFTSSEVSASLWNLAWAGLVTN
DTFAPVRAHLAGGHSAHKLKKPAPAPRAAVRRGAARLSGSRFGTNTGMSRRGRMGLLSTP
ADMVSPTDSGRWSRVWTEELDPTIAAHARAELLLDRYGVLTRGAVAAEDTPGGFSAVYRV
LSLAEEKGVARRGYFVEELGAAQFSTANTVDRLRAYDREVENQGGSTQTTRTVVLLAATD
PANPYGSTLPWPAPSLLGQIEQEFTKHKPGRKAGAVVVLIDGRLGIYLERGGRTVLLFSS
DVTDVRAAAPLLGELVRRGAAEKIMIEKVNGLGILENLAPLVSTQEQAVEPPMHPITALR
RGLEEAGFYATPKGLRMRQEI
NT seq 4566 nt   +upstreamnt  +downstreamnt
atggtcaacagcgattcgctactggaacgggacggtaccgccccggaccagcactccata
cctgctgtagacatcgatcatctgacgcgcgggcttactcttgccgacgctatcgggatt
tttccgcaggaaaacgcccctgccccacaggtagaaatcacccgcactgagattgaagaa
ttcgacccggcagagctctcccccgctgagatagcgcaagaagcaacgccggataccagt
ggctaccaggcgtctatctggccgcacgttgaagagagaattgttgatttggtggagaag
taccgctccaccattgtgtttgccaactctcgcggtttggcggagaaactgaccgcgcgt
ctcaacgaaattcacgctgatcgtgaggaagcacgagcggctatggaaggctcctccgaa
gattcggaaaacgcctctgcctccccgcgagtgacgtccccgccgcagaatatttccgaa
gctctcagccaggcgctggcggcaaacggtggcgctcgaatcgaacgtgaagacgccaaa
atcaagcgcccaccagcgcaaatcatggcgcaatccgccactgcccacggcgtcccgccg
ctcctcgcgcgagcgcaccacggatcggtctctaaagaccagcgatcggtgattgaagaa
gcgctcaaatcaggtgaacttcgctgtgtggttgccaccagctcccttgagttgggcatc
gatatgggtgcggtagatctggtaattcaggtggaatcccccggttcagtcgcctctggt
ttgcaaagagtaggacgcgcgggccaccaggtaggagaaatttccagaggctacctctat
cccaagcaccgcggtgatttgctcaatgcaacggtgaccgttcaacgaatgctcgcgggc
aatattgagccgctctctattccgcaaaatccgctggatattcttgcccagcaaaccgtg
gctgcctgcgcgcttggacctatcgatgtggagtcctggtttgaggcgcttcgccatacc
gcccccttcgccaccctgccgcgcagtgcttttgaggcaaccttagatttgctctcgggt
aagtacccctccgatgaatttgctgagttgcgcccgcgcgtcatttgggatcgcgatgct
ggaacgctcgaaggccgtcccggtgcgcagcgggtggcggtaacctccggcggtacgata
cctgaccgcgggctgtttcccgtttacattgtgggttcagaagactccaaagcccctaaa
cgcgtgggtgaactcgatgaagagatggtgtacgagtcccgggcgggcgacgtcatcgct
ctgggtgctacctcctggcgtattgaagatattagccacgaccgcgtgagcgttaccccc
gcccctggtgtgcctggcaagctacctttctggcatggggaggggccgggacgtccggtc
gaactcggccgcgcgctgggccagttcacccgtgagctcgccacagagattcagaatgag
cctgctgccgctcgtcagcgtgtagaagctatcggtcttgacacgtgggctgccgataac
gtgcaggcctacgttcgcgaacaatccgaagcaaccggggcggtgccttctgaccagcag
ttcatcgtagaaagattccgcgatgaaattggggactggcgagtcgttctacactccccc
tacggcatgcccgtgcacgcaccctgggcgctggccgtcggtcaacgagccgaagatatg
ttcggcgtcaatgcctcagcaatggcggctgacgacggcatcgtgctccgcattccttcc
atcgaggcggaaccacccggggcatccctgttcttcttcgacaccgatgaactcgaaaac
atcgtcaccgaacgagtaggttcctccgccctgttcgccagccggttccgcgaaaatgca
gcgcgcgccttgcttctgccccgccgcgacccagggcggcgaaccccgctctggcagcaa
cgccagcgatctgcccaacttctggacgtcgcccgcaaattctccaactttcccatcatt
ttagaaaccgtgcgcgagtgcttgcaggatgtctatgatctgcctgtcctaatggacatc
caccgcaaaatagactcccgcgccatccgcgtgaacgagattgaaacagaatccccctcg
ccttttgcgcgcacgttactctttgggtacgttgcacagttcctctacgagggcgattcg
ccccttgcagaacgacgcgcggcagcgctcacccttgacccggcgctactttccgaattg
ttagggcgcgatgaactgcgtgaattgctcgacgccaacgtcattcgccaaaccgaagcc
cgcctgcagcacagcgtggcaggctaccgctaccaaggaattgaaggcgccgctgacctg
ctacgtttgctcggcccgctcaacgcccatcagctagcagcccggctgagggtcaaccgc
tctagcgaggaaactgaagaagaacccctcacctcagagcaggctgaagcgtttgcccgc
gaactagtttcagccaaccgcgctcttgccttcacccttcatggcaccgaacattttgcc
gccattgaggacgccgcccgcctgcgcgacggtctaggtgtgcccctccccatgggggtt
cctctcgctttcctcgaaccggtcccccaccccctacacgatttggtgggtcgctacgcc
cgcacccacgccccctttaccaccgcccaagccgcggcggcgctggggctgggtaccgcc
gtcgtcgaaaccactctgcgcgccatggcaacggaacgcaggatcatttccggcgaattt
ttacccgaagaaatccgcgcagaactagcccttgcccgcaccggaacggtcgaagcagca
ggcaccgaatgggtcgacgccggtgttctacgcaccctccgatcccgctcgttggcagcc
ctacgcgccgacgtcgaaccggttgcccaacacatctatgggcgttttttgcccccttgg
cagcacgtacagtcgtgggaaatcaccgaagaaacctttgcgcccggcacttttggtgcc
ccggttgggggcaaaaaagtctcggcgaaagcctatgaagactccatgctcagcggatac
gacgggctactcaccgcgattgaccagctggccggagtacgcataccggcatccgccctg
gagcccctggttctgcgctcgcgggtgaaagactactcgccctcactattggaccgcgcc
ttatccagtggcgatgtgctgtgggcaggcgacggcgaactcgcaggcgatggctggatt
accctccacctcaccgaagccgcttcactgaccctcccctccgatggcgaacgccaggat
aggctctccgaactttccccgctagatcgagcggtgtatgaggtgctcggcggtggcggt
ctattcttccagcaggttcgcgaggcactttcccgctacgccgcagaagctttgcaggca
gtagaaccgagtgcgaaccccaccgagtcaggcgcaggacaccctgagaatatgcccttt
acgagctccgaggtctctgcgtccctctggaacctcgcctgggcaggactggttaccaac
gacaccttcgcaccggtacgcgcgcatctcgccggcgggcactcggcgcacaaacttaaa
aagccagcaccagcgccgcgtgctgcagtacgccgcggtgccgcgcgtctttccggctcc
cgctttggtaccaacaccggaatgagcagaagggggcggatggggttgctttctaccccc
gccgatatggtgtctcctacggattcagggcgatggtcccgggtatggaccgaagagctg
gaccccacgattgccgcccatgcccgcgccgaattactcctggaccgttacggcgtgcta
acgcgcggcgccgtggcagcagaggacacccccggcggattctcagcggtatatcgcgtg
ctctctctagcagaagaaaaaggagtggcgaggcgaggttactttgtggaagagctaggg
gcagcacagttctcgacggcgaacacggtagaccgcttgcgcgcctatgaccgggaggta
gagaatcagggcggctccactcaaacaacccgaacggtcgttctacttgcggcgaccgat
cccgccaatccctacggctcaacgctcccctggcctgcgccgtcgttactgggtcaaatc
gagcaagaatttaccaaacataaaccgggcagaaaagccggcgcggtggtggtcttgatt
gacgggcggttaggaatctacctcgaacgaggcgggcgaaccgttctactctttagctcc
gatgtgaccgacgtacgagcggcagcccccttgcttggtgagctggtgcggcgcggagca
gcagagaaaatcatgatcgaaaaagtcaacggactgggaatcttagaaaacctggcacct
ttagtttccacccaagaacaggctgttgaacccccgatgcaccccataacagcactgcgt
cgaggtctagaagaagccgggttctacgctacccccaagggtttgcgtatgcgacaggaa
atataa

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