Rothia amarae: IDM48_11365
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Entry
IDM48_11365 CDS
T06930
Name
(GenBank) relaxase domain-containing protein
Organism
rama
Rothia amarae
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
TraI_hel_assoc_N
SH3_13
UvrD_C_2
Dodecin
PhoH
FhaA_N
Motif
Other DBs
NCBI-ProteinID:
QOW64939
UniProt:
A0A7S6WXG3
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Position
p1:31318..36603
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AA seq
1761 aa
AA seq
DB search
MMTVHKLSAGEGFKYYTSEVATGDVLRDPNRALGDYYTVEGMPPGQWLGSGAASLALSGE
VTEEQMGALFSGNALPITTHELSQLLASAPNQSEFIRHTVMEKARVEAAEKAWKIHVLLR
QGKNQNEISEEISQEKKCAPRTVSYRLEQYKNAGNDFAKGTDERYFDASLLPELKREFIA
NYSMTEAESARARTTAEREVKAAKSLKSAAETPHTFETKTPFIKRLEEEHARFNRQNSRE
PNKGEKREILNRVGGQMFREEHRRSPRTNEEFTRWVASQRKPKQQTVAGFDLVFTPTKSV
SIAWGLGDERLRRGIEAAHERAIADALTYLEDNAVYTRRGAAGIRQEETKSGLIATKFRH
YDSREGDPNLHDHLVIANKVQGKDGRWLTLDGRMLYAHNVAASELYNSKIAEYIHADLGL
EFVGNERKGRKIYELAGINPETINAFSSRRTQVKKTLAELEKKYIEEHGYAPNEKARIKL
SQRATLATRPHKSEARSLAELHDVWTQSVSDKGLNLPTNEALLPHLQSASTQHAAAVIEG
VSQALATSDMEHAANIIERLEQTRSTWKRTHIEAETLRYFRDVTSGPGVDETKFKNTVAA
TVEQSVALNDFAQDKHLPDNSLRSDGSSVYRRADAELFSSTGIYQAERNVVTAATSEKII
PAATNDLFDAQRDYLKAKGGLLSSTQEGMARAFVTDERLLVVGIGPAGAGKTTSMKVAVD
TVHATGQRVFGLAPTAVAASVMKNELGIEASTIASFVGDNSLISSQVKSGDMILIDEIGM
ATTPDLAKILDTARDKGASVRGIGDYRQLSAIGSGGALRLIESKAGAIYLEDVFRFKNKE
EAAASLALREPSLVGEDKPFSWYLDNGRITAGNKEGMVADVFAAYTADVADGKNSLMLAG
TNEDVKALNVLGQNAAIAAGTVQESESKSVLLDDGTCAYVGDKVLTRKNNYQLKTNQGKD
FVKNGDLWEIRAIAEDGALLLQHTNHRGMVGVPAEYAGEYVQLGYASTINRAQGSTVDTT
HAVVDASTDRAAAYVALSRGRESNKLYVATDESTSRDDVLAAITANFDRNLSFHEETAAQ
RTAERNVATRLARYDDLATGAMESAMKNVVIKSIGEDAAQPIYTADGWGALANELAKTYR
GGLDPEAVFTRAWQQNPLDDAEDIAAVLQWRVAGVRERDESLRERFGEDVRPLAHIPDES
LEKLIETAKKRTTPLSEIEIEDKRWATRDYALVKTDRLREMLTTTNKALEANERTDPKTA
AHITENMNLMQSEITRRRWSSPEQKHVEAIVRGEKPRSGHDFTILNALQWEKTVRDEVLV
PTVETKDFKPERVTKGVSGYSLDSFWEYDRYTPESMQRVLKVEHAQVKDLVQLRGQQIAA
EKPAWAQSLGEVPAHERNAKHWYRVAAEVEAFRQKYKVPDGDRQTVPKSLIRPGNRGDYL
AQQVTEVHKRSRLSSTLKSSVENKLSASGTEMQVRAAEKPTQAEKLMGQRGIRQATPAKG
ENMQQVNNLWSQLEDAYRAEQQAKAQLASATEALAQSQASYRAAQQNAQARAEQLMQNMA
SDYAPVQQAQARVEDASFFTRGGRERELEAAQRAFAEKYGVTEVPGEGERSWMMNDPEYA
AASRTVEDLGSQVKSTQADVDAVQGVFESAHARREDVYTDYAQVRDSNPETAIVSEDMTP
AQVRELRSSRWRVDETLLGVGIRPDFAKISRSSGTFHEEENKQRHPVSVRDLQAQINQQK
HEQQHEDSWDAELQTSRGLHR
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgtgcataagctctcagccggagaggggtttaagtactacaccagtgaagta
gccactggcgacgtactacgcgaccctaaccgcgccctgggtgattactacacggtcgag
ggcatgccgccgggtcaatggctaggctctggtgctgcatctttagccctaagcggtgaa
gtcacagaagaacagatgggcgctcttttctccggaaacgcgctaccaataaccacccat
gagttgtcacaactgttagcttctgcgccgaatcagtctgaatttatccgtcatacggtc
atggaaaaagcacgggtagaagcagcagagaaagcatggaaaattcatgttttattgcgc
caaggtaagaaccaaaatgagatctcagaagaaatttctcaagagaagaaatgcgcacca
cgcactgttagctatcgtctagagcaatacaaaaatgctggtaacgacttcgctaaagga
actgatgagcggtactttgatgcgtctcttctacctgaactcaagcgtgagtttatagcc
aactattcgatgactgaggctgaatcagcccgcgcacgaaccaccgctgaacgcgaagtc
aaagccgcaaaatctctaaagagtgcagcagaaaccccacacacttttgagaccaaaaca
ccttttatcaaacgtcttgaagaagaacacgcacgttttaaccggcaaaactcccgtgaa
cctaataagggtgaaaagcgtgaaatcctcaaccgcgtaggcgggcaaatgttccgggaa
gagcaccgccgctcccccagaaccaacgaagaattcacccgttgggtagcgtcccaacgc
aaacccaaacaacaaactgttgccggttttgacctggtattcacccccactaagtcggtt
tctatcgcttggggattgggtgatgaacgtctacgcagaggtatcgaagcagcgcatgag
agggctatcgctgatgcactgacctacctggaagataacgctgtgtacactcgtcgtggt
gccgctggtattcgtcaggaagaaacaaaatcagggttgattgctaccaagttccgtcat
tatgattcccgtgaaggcgaccccaacctacacgaccacctggtgattgcgaacaaggta
caaggcaaggacggtcgttggcttacccttgatgggcggatgctctacgctcataatgtt
gccgcttctgagctctataattccaagattgctgagtacattcacgctgaccttggcttg
gaatttgtgggcaatgagcgtaagggccggaagatttacgaactggcaggtatcaaccca
gagaccattaacgccttctcttctcgtcgtactcaggtgaagaaaaccttggctgagtta
gagaaaaaatacattgaagagcacggttacgcacccaatgaaaaggcacggattaagctc
tctcagcgagcaacgttggctactcgtccgcataaatctgaagcgcgttccttggctgaa
ttgcacgatgtatggacacagagcgtttctgataagggactgaatcttcctactaacgaa
gcccttcttcctcatcttcaaagcgcatcgacccagcacgcagcagccgtgattgaaggt
gtctcccaagccctcgccacctccgatatggaacacgcggccaacatcattgaacgccta
gagcagacccgttcgacctggaaacgtacccacattgaagcagaaaccctccgctacttc
cgcgacgtgaccagtggtcctggtgtagacgagaccaagttcaagaacaccgttgccgcc
accgttgaacagtcagtagccctcaacgacttcgcacaagataagcatctaccagataat
tctttgcgttcagacgggtccagcgtctaccgccgggcggatgccgaactgttttcctcc
actggtatttaccaggcagaacgaaacgttgttacggccgcaaccagtgaaaaaattatc
ccagcggcaacgaatgacctctttgacgctcaacgtgattacctcaaagcaaagggtggt
ctgctctcctctacccaggaaggtatggcgcgcgccttcgtcactgacgaacgtctctta
gtcgtgggtatcggccccgctggtgcaggtaagaccacctccatgaaggttgctgtagac
accgtgcacgccacgggccagcgcgtttttggtctagcaccaacagcagttgcagcgtca
gtgatgaagaatgagttgggaattgaagcgtccacaatcgcttctttcgtgggagacaat
tctcttatctcttcccaggtaaaatctggggacatgattctcattgatgagatcggcatg
gccaccacacccgacttagccaagattctcgataccgcccgcgacaaaggcgcatccgtt
cgtggcatcggtgactaccgccagctttccgctatcggttctggcggagcactgcgactg
attgaatccaaggccggggctatctatctcgaagacgtcttccgcttcaagaataaggag
gaggcagcggcctctcttgcgctccgtgaaccatcccttgtgggtgaggacaagcccttt
agctggtatctggacaacgggcgtattaccgcaggtaacaaagaaggcatggtggctgat
gtcttcgccgcctatactgccgatgttgcggacggtaagaactcgctcatgttggccggg
actaatgaggatgttaaagcactgaatgttctagggcagaacgccgcgatagccgctgga
acagtgcaggaatccgagtctaagagtgtgctactggatgacggaacctgcgcatatgta
ggagataaggttcttactcgaaagaacaactaccagctgaagactaaccagggcaaagac
ttcgtgaagaatggagacctctgggaaatccgggctatcgcagaagacggagctctactt
cttcagcatactaaccaccgcggcatggtgggtgtgccagcggaatacgccggcgaatac
gtccagttgggttacgcatctactatcaaccgtgcccagggttcgaccgtggacaccacc
cacgccgtggtcgatgcttcgaccgatagagcagccgcctatgttgcgctctcccgtggc
agggaatccaataagctctacgttgctaccgatgagagcactagccgcgacgacgtactg
gctgctattaccgctaactttgaccgtaacctctccttccacgaagagacagcggcccag
cggacagccgaacggaacgtggcaacccgcttagctcgttacgatgacctggcaaccggg
gcgatggaatcagccatgaagaatgtcgtcatcaaatccattggtgaggacgctgcgcag
cctatttataccgctgatggatggggcgcactagcgaacgaactcgctaaaacttaccgg
ggcggactcgaccccgaggcggtcttcactcgcgcctggcagcagaacccactcgatgac
gccgaagatattgccgctgttcttcaatggcgcgtggccggagtccgtgagcgagatgaa
tccctgcgagagcgttttggtgaagacgtgcgccccttggctcatatccccgacgaatcc
ttagagaagctgattgaaacagccaaaaagcgcactactcccctatctgagatagagatt
gaggataagcgttgggcaacccgcgactacgctctagtgaaaactgaccggttacgcgaa
atgctcaccaccaccaacaaagccttggaggcgaacgagcgaaccgaccccaagaccgcc
gcccacatcaccgagaacatgaatctcatgcagtcggagatcacccgccgccgctggtcc
tcccccgaacagaaacatgtggaagctatcgtccgaggtgagaaaccccgttcgggccat
gacttcacgattctgaacgccttgcaatgggagaagaccgttcgtgatgaggtacttgtc
cccaccgttgaaactaaagacttcaagcctgagcgggttactaagggtgtgagtggctat
tccctggattccttctgggaatacgaccgctatacgcccgagtctatgcagcgtgttctc
aaagttgagcacgcacaggttaaggatttggtgcagttgcggggtcagcagatcgcggcg
gagaaacccgcctgggcacagagcttgggtgaagtaccggctcatgagcgcaacgctaag
cactggtatcgggttgccgctgaggttgaagctttccggcagaaatacaaggtccccgat
ggtgaccgccagactgtgccaaagtctctgattcgtccgggaaacaggggcgactacctg
gcccagcaggtcactgaggtacataagcgctctcgtctgtcttcgactctgaaatctagt
gtggagaacaagctctccgcatccggtactgaaatgcaggtgcgggcagcagagaaacct
acccaagccgaaaaactcatgggacaacgcggcatcagacaagccacaccagcaaaaggt
gagaacatgcagcaggttaataatctgtggagtcagttagaggatgcttaccgtgcagag
caacaagctaaagcgcaacttgcttcagccaccgaagcactggcacaatcccaagcctcc
taccgtgcagcacagcaaaacgcccaagcacgcgcagaacagctcatgcagaatatggcc
tctgattatgccccagtgcagcaagcacaggcgcgggtcgaggatgctagtttcttcact
cgtggtggtcgtgagcgtgagcttgaggcagcccaacgagcttttgctgaaaagtatggt
gtaactgaagtacctggtgagggagagcgttcctggatgatgaatgaccctgagtatgcg
gcagcttctcgtactgtggaggacttgggttcacaggtgaagagcacccaggctgatgtt
gatgcggtgcagggcgtatttgagtctgctcatgctcgtcgtgaggatgtgtacaccgat
tatgctcaggtccgcgatagtaatccggagaccgctattgtcagcgaggatatgactcct
gctcaggtcagagagcttcgttcttctcgttggcgtgtggatgagactctactcggtgtt
ggtattcgacctgacttcgcaaaaatctcgcgttcctctggaacttttcatgaagaagaa
aacaagcaaagacacccggtttcggtgagggatttgcaagctcaaattaaccagcagaaa
catgaacaacagcacgaggattcatgggatgccgagcttcagacaagccgaggtttgcat
cgttaa
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