Riemerella anatipestifer ATCC 11845 = DSM 15868: Riean_0676
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Entry
Riean_0676 CDS
T01363
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
ran
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
ran02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ran00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Riean_0676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ran03021
]
Riean_0676
Transcription machinery [BR:
ran03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Riean_0676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
PgaD
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
ADQ81840
UniProt:
E4TBL1
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All DBs
Position
complement(729343..730209)
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AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQKIRAGDKVALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKELMLESLQIEIERALQTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNSRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattaccaagcaggttaccaatagggaaacggcatcattagataag
tatttgcaagagataggtaaagtagacctaattactgcagatgaggaggtagaattggca
caaaagattcgtgctggggataaggttgctttagaaaagctaatcaaagccaaccttcgt
ttcgtagtttctgtgtctaaacaatatcaaaatcaaggcttgtcattaccagatttaatc
aacgaaggtaatttaggattgatgaaagccgctaaaagatatgacgaaacgagaggtttc
aaatttatatcttatgcggtgtggtggattagacaatctatcttacaggctttagcagag
cagtctagaatcgttcgtttaccattgaacaagattgggtcaatcaataaaattaacaaa
gcatacgctcatttagagcaagagaatgaaagaccgccttcaccagaagaattagctgaa
gttctagatatgagtgaggaggatattaaagagtctatgaaaaacagcggaagacacctt
tctatggacgctccgctggtagaaggagaagactctaacctttacgatgttcttcgttca
ggggaatctcctagcccagacaaagagttgatgctagaatctttacaaatagagattgaa
agagcattacaaacacttacgcctagagaagcagatttagtaaggctttacttcgggctt
aacggcaaacaccctatgactttagaggaaataggcgaaacttttgaccttacgagagag
cgtgttcgtcagattaaagaaaaggctatcaaaaggttaaaacacaactcaagaagtaag
attttgaagtcttatttaggaaaataa
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