Riemerella anatipestifer ATCC 11845 = DSM 15868: Riean_0879
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Entry
Riean_0879 CDS
T01363
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ran
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
ran03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ran00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Riean_0879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ran03021
]
Riean_0879
03400 DNA repair and recombination proteins [BR:
ran03400
]
Riean_0879
Enzymes [BR:
ran01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Riean_0879
Transcription machinery [BR:
ran03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Riean_0879
DNA repair and recombination proteins [BR:
ran03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Riean_0879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADQ82040
UniProt:
E4TBZ3
LinkDB
All DBs
Position
complement(972468..973463)
Genome browser
AA seq
331 aa
AA seq
DB search
MAILNFIKPDKVILLNSTEFQGQFEFRPLEPGYGLTVGHALRRVLLSSLEGYAITSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQLRLKAKSENAPSEQVTAKIANLEQLTAGDLGKFIS
GFEVLNPELVICNLTKDVNLEMNFSINKGRGYVPSEQNKSNNAPIGTIAIDSIYTPIKKV
KYSVENYRVEQKTDYEKLILDIETDGSISPQNALIEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLAEMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVSKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttataaaacccgataaagtaatcctacttaactccacagagttt
caaggtcagtttgaatttagacctttggagccaggttatggattaactgtcggtcatgct
ttaagaagagtattactctcttctttagaaggttatgctattacatctatcaaaatagaa
ggcgtagagcacgaattttccaccattccaggagttatagaagatgtaacagaaattatt
ttaaacttaaaacaacttcgcttaaaggctaagtctgagaatgctccttctgagcaagtt
acagctaaaatagctaacttagagcagcttacagcaggagatttaggtaaatttatttct
ggttttgaagttttaaatcctgaattggtgatttgtaatcttacaaaagatgtaaattta
gaaatgaattttagcatcaataaaggtagaggttatgttccttcagaacaaaataaatca
aataatgctcctatcggtactattgctattgactctatttatactccaataaagaaggtt
aagtacagcgtagaaaactatcgtgtagagcagaaaacggattatgaaaaattaattcta
gatatagaaactgatggttctatctctcctcagaatgctttaatagaagcttctaaaatc
cttatataccacttcatgttgttctctgatgagagaattacattggaaacagaagcggta
aaggcatctattcagtatgatgaagaaacattacacactagacaattacttaagtctaaa
ctagcagagatggatctttctgttagagctcttaactgcttgaaagcagctgaagtagag
actctaggtgaactagtttcttatagtaaatctgatttgatgaaatttagaaacttcgga
aagaaatcattaaccgaacttgaagagcttgttcattctaagggacttaacttcggtttt
gatgtaagtaaatataagttagacgctgataaataa
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