Riemerella anatipestifer ATCC 11845 = DSM 15868: Riean_1595
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Entry
Riean_1595 CDS
T01363
Name
(GenBank) YD repeat protein
Organism
ran
Riemerella anatipestifer ATCC 11845 = DSM 15868
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcdB_toxin_midN
SpvB
RHS_repeat
FG-GAP_3
RHS
Motif
Other DBs
NCBI-ProteinID:
ADQ82752
LinkDB
All DBs
Position
1751947..1761084
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AA seq
3045 aa
AA seq
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MKQVYKYILYFVLLSISGGAMVKVFPKLLPWGTSVSKTEISSPPITKEKTVIHSPETTSE
ARLSPSKSLKLNYQGFSAYFSEGSVSRAVKVSVLGLSENHLPRLSSDLVNVTGGTAGYRL
LPKKTKLKKPVEIKISYDKAKLPSGYTEEDIDLFYFDAKKSAWQKLPKDSLMIGASAVKA
KTFYLSDFIAGVIKLPESPDTSGFTPTSISGLKAASPMVGIQPLSVPTPSPDGSGSTSFG
IELPKGRAGMQPSLQLQYSNEGGNSWLGLGWNLALPSLTVDTKFGAPRYDAQKETETYLL
SGEELLPNAHRAEWENRSADKIFYPRREGAFQKIHRKGASPNAYTWEVRSRGGVAFYYGD
SEDSRLSDAQGNVGYWALREQKDLRGNTVTYEYTKAQGVLYPKAIYYTGKDGAKGAYSVH
FITDKDLGEPQRKDLQISARLGFKQEYNRLLRKIEVKYGTAMVRSYELVYKEGAFRKSLL
SEIKVYDAEGKLFYTNTLDYYDDVRDSSGKYVPFGEFKKWEVPKDGIDYTFLGIKGFSGH
PTLAGTSSSNSKGGSFRIGVGPSADAYKINTVGVSGGYSSGKTENRVFLQDLDGDNLPDK
VYIKKDKVYYRKNLSSQGLTKFSDELKEINLPHMGISESSSFSFGVDLQVSRATIGYDRQ
STTSRTFSYFMDFNGDGLVDFADGGRVYYNRLVNGVPTFYATSSGTPAPIVASNNKLTLE
GSTKYTKEELEKHNPLHDVVRTWRAPHTGKISVKHAYQLQQDLSEARLNYKKNDGTEKAD
GVRLYFQHRDSLYWKQDIDAEDYTLKHREDTLEVKQGELLHFRVSSKYDGNFDQTLWTQT
IEYKTIGDNEKDYNGLSLKYYGSEADALHPSAQGYIFSISAQPKFGGKLTKGVTTDLVKV
KVYKYGFSISPVLLYERTFQAAETADLDLSTINLGNFNAEEGISITVESPTEINWKQLTF
TPEVRFINEQNEEETQPLNVDFLISEKLDVHYAPKLVMPQQKGKLRLLLEANFSSSEAGT
LEITAKQSGKVAARSRFNVSRLTSALPVTEPMVLDSISKDEPLFVEIKVSNKGLYRSLVN
KSMPVTLQIKDSIKIPEDDPRQPDEKYEIITTTQLHNAYTVYTLYHERNENILLGKNFRG
WGGFILNGTLAGEMIDELRLVDFTGNYSDDKDHVPDTNPDNRSPEQEEPGMEVSKAYFFR
GLVSYPKKRYQGLEEDIYVSERYFSPSRLGENDLEKHLDTSLPQLSGGSGGALIMVSESR
SNAFSGGAAIVGGSYSEGVSEVMQTMSDFNGDRFPDFVRGGHVQFTEPRGGLEARTIGLG
GSFSRSKVETNGGSFSGSFQHGEPKSSMTFKITRNDQQRLTITRSTDDADKAKNSVSVSG
SVASSNDYSEYTYTDLNGDGLADRVTKDGYISYNTGYGFLPQEQWVGFGGLLTGDSQDFS
AGLGYSAYGGSFTGGLNYTNSVTQSRTQFLDMNGDGLADRVVYGDNNTLMYQNLGNTWDT
TPLVIPKVAGNPIAVNRAISYGGSAKYSVYFKWGFIKFGFTAGGFAGKSTSRMEAAFMDV
DGDGNLDYILSDGEDDLRVATSNIRRTNRLKSVKNATGSTFEVDYEWVAPTYENPNSKWV
LSRVTTFDGHQGDGEDYTISRFTYKDPYYDRREREFYGFAEVKQEQLDPKDGKVLRTSVQ
HYYNRDYFRKSLAKNSYTLDAQGRKLTESTVQYQIKNARTNTDWEAERLALPESDAISVF
IAPTETTERQYEGAGYLEHKIAQSYDAKGNITTYQDFGTGNPNSALKAEITYYESETPYF
GGIAKSITVHDANGLVRKREADINPQTAETTQIRNYFTADRYARTDLSYDAYGNLAQITG
AENHKGERSSLRYEYDEETHSHLTKITDHFGYETRTAYDYRFNAPLEVTDRNGEQLHYTI
DAKGRTTHILAPKEAAAGVPYTVAYDYYPEAKVPYAKTRNYDAEHGKDIITYTYTDGLGR
TLQVKKTAALFQGKNQADAERLIVSGKQVYDALGRVVESYYPTTETPSEAFSTQVATVMP
TTTAYDEKDRPVLQTLPDGSTVATAYEVSETAGTKTLKTTVTDALGRVSHSATDVLGRTL
KQVQPTGIETTYHYNAQGELLKVTDAEGHQTLSEYDLLGRRTQLTHPDAGITTLAYDAAG
NLIRRQTAQIREQMPDAAIEYHYDHNRLQEIRYPKHPENNVRYHYGKQSESPRRRGRLWL
VEDASGGTEYFYGSMGEVEKEIRSLRITPTEVHTYITEYGYDSFNRIQTMTYPDGEVLDF
GYNRAGQLTTLTGKKGNYEYTYLKQQGYDEFEQKVYRQYGNGTETRYTYDPTMRRLATLN
TQNTKRTFQDNRYTYDLVGNILQVENQVPIVNYALGGASSYQYQYDELNRLISATGTYTG
EATSAEYQLQMQYNKLNGIVQKSLTHKQNGKDKGYVLDYVYGNKSHPHALSELKDSTTPK
PRAYEYDGNGNPISYEGFKDFRVMVWDEENRLQGLNDNGKLHLYTYDHTGERAVKSSAES
QKTVINGVSSAVIVHAENYTAYVNPYFVVNKGKFTKHYFEGTSRIVSKLGEGTFHQPSGI
NAGGIDYVKQSAKVQEAIDQYIKGLNIPPGPPTQHGIYGTPDFTGQEYPSIDWSDISQDQ
EPPEGWPRPPKFNEPGDVPGPPVQYGDPVKPDNVKGGFGYVDNGIEEKNLYFYHPDHLGS
SSYITDANGDVNQHTEYMAFGEVLFDEHKVSRRMPYLFNGKELDSETGLYYYGARYYDAR
VSLWLGTDPLSGYNPIMETEHYIDGQHNGGVFNPMNFATYSYTYQNPILYIDPNGKQTFF
LHTRNFAPFDRFGGGFEGDGDNRKFSTAKNMSYRIAGTTTINLDKFTMSNVRGGKAHSDW
LGTSFSSAISPTNVDYSYADNGRKTQNYYMHIYGKNKALLWGIVSPDIDTNVNLEVSNIK
KGQSFDISGNVYGDKFPSNETYITDKKGNSLFLGVSGADGSPFTSLAGDNDRPMSSFKFK
VLLNKDDTFRGVRYRGKDYTGSQWNSQFEKLNPRDGNVQSGKSAE
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagtttataaatacatcttatatttcgtattactaagcatttcggggggagca
atggttaaggtgtttccaaaacttttgccttggggaacttcggtgtcaaaaactgaaatt
tcttctcctcctattaccaaagagaaaacggttattcattctcctgagacaacttccgaa
gcgaggttatcgccaagtaagtctttaaagctgaattatcaaggtttttcggcttatttt
tcggaggggagtgtttctcgtgcagttaaggtttccgtattggggttgagtgaaaaccat
ctcccacgcttaagctctgatttggttaatgtaacgggggggacggcaggctatcgtttg
ttgccgaagaagaccaaactaaagaaacccgttgaaatcaagataagttacgataaagcc
aaacttccgtcgggttatacggaggaagatatagatttattttactttgatgccaaaaaa
tcggcgtggcagaaattgccgaaggacagtttgatgataggagcttcggcggtaaaggcg
aagactttctacctctccgattttatagcaggggtgataaaattgccagaatcgccggac
acttcaggctttactcctacgagcattagtgggcttaaagccgcttcgccgatggtgggc
attcaaccattgagtgtacctacgccaagtccagacgggagtggtagcacttcgtttggg
atagaattgcctaaaggcagggcaggtatgcagccctcgttgcagttgcaatactctaat
gaggggggtaattcttggttaggactggggtggaacttagctttgccttcgcttacggtg
gacaccaaatttggagcaccgaggtacgatgcccaaaaagaaaccgaaacctatctatta
tcgggtgaagaattactaccgaatgcccacagagccgaatgggagaaccgaagtgcagat
aaaatcttctatccgaggagagagggggcgttccaaaaaatacataggaagggagcatca
cctaacgcgtacacttgggaagtacgttccagaggaggcgttgcattttactatggagat
agtgaagacagtagactgtcggacgcccaaggcaatgtgggctattgggcattaagggag
cagaaggatttgcgtgggaacaccgtaacttacgagtataccaaggcgcagggcgtactt
taccccaaagccatttattatacagggaaagacggcgctaagggggcttattcggtacac
tttataacggataaagacttgggcgaacctcaacgcaaagacctccagatttcggcaagg
ttaggctttaagcaagaatacaaccgactgctccgaaaaattgaggtaaagtatgggaca
gcgatggttcgttcctatgagttggtgtataaagagggggcgtttagaaagtcgttactg
agtgaaattaaggtgtacgatgccgagggcaaactgttttataccaacacgttggactat
tacgacgatgttcgggacagttcgggcaagtatgttccttttggcgagtttaagaaatgg
gaagttcctaaagacgggatagactacaccttcttggggattaagggcttttcggggcac
cctactttggcggggacttccagctccaatagtaaggggggcagtttccgtataggggta
ggaccttcggcggacgcttacaaaatcaatacggttggagtaagtggaggttacagctct
ggtaaaacggaaaacagggtctttttgcaggatttggacggcgacaatcttccggataaa
gtttatattaaaaaagataaagtttattaccgtaaaaacttatcctctcaaggcttaact
aagttttcggacgaactgaaagagattaacctccctcatatggggattagtgagtcttca
tcgtttagttttggagttgatttgcaagtttctcgggcgacgattggctacgaccgccag
agtacaaccagcaggactttctcttattttatggattttaatggcgatggcttggttgat
tttgccgatggtgggcgggtgtattacaaccgattggtgaacggagtgcctaccttctat
gccaccagcagcggaacaccagcacccatagtggcgagtaataataaattaactttagaa
ggcagtacaaagtacaccaaggaggaattagaaaaacataatccattacacgatgtcgtt
agaacttggcgagccccacatacgggaaaaatatcggtaaagcacgcctaccagttgcag
caagatctttccgaagcccgtctaaactataagaaaaacgacggtacggagaaagccgac
ggtgtgaggctttactttcagcatagggacagtctttattggaaacaagacattgatgcc
gaggactacactctaaagcacagagaggatacgttggaggttaagcagggcgaattgctt
cactttagggtaagttctaaatacgacggtaacttcgaccaaaccctttggacacagact
attgagtataagaccataggcgataatgagaaggattataacggtttgagcttaaagtat
tacggttcggaggcggacgctttgcacccttcggcacaggggtatattttcagcatctct
gcccaaccgaagtttggagggaagttgactaagggcgttacaacggatttagtcaaggta
aaggtttataagtacgggtttagtattagtccggtgttattgtacgagcgtacattccaa
gcggcagagacggcggatttagatttaagcaccatcaatttgggcaatttcaacgccgag
gagggcatcagcattaccgtagaatcgccaacggaaatcaactggaagcaactcactttt
acgccggaagttcgctttatcaatgaacaaaatgaggaagaaacccaaccgctgaatgtg
gactttctaatcagcgagaagttagatgtgcactatgctcctaaactcgtaatgcctcaa
caaaaggggaagctaagactattgttagaggctaattttagttcttcagaagcaggaacg
cttgaaatcacggcgaagcagtcgggtaaggtagcggcgaggagtagatttaatgtatct
cgtttaacttcggcacttcctgtaacggagccgatggtgttggatagcatcagtaaagac
gagcctttgtttgtggagattaaggtgtctaataaagggttgtacagaagtttggtaaac
aagagtatgcctgtaacgcttcaaatcaaagactcgattaaaattccggaggacgaccca
aggcaacccgatgagaagtatgaaatcatcacgacgacacagctacacaatgcttatacg
gtctataccctttaccacgagagaaacgagaatatattgcttggcaagaattttagaggt
tggggcggttttatccttaacgggacattagcgggagagatgatagatgaattgaggtta
gtggactttacggggaactattcggacgacaaagatcatgtaccagatactaacccagac
aatagaagcccagaacaggaggagccgggaatggaagtttctaaagcctacttttttaga
gggttagtcagctatcctaagaaacgttatcaagggttagaggaagatatttatgtttct
gagcgttacttttcgccatcgcgtttgggggagaacgatttggagaaacacttagacact
tcgttgccgcagctttctggggggagcggtggggcgctcattatggtaagtgaaagccga
agcaatgctttttcgggaggagcagccattgtgggcggttcatattccgaaggggtatca
gaagtaatgcaaacgatgagcgactttaacggcgaccgtttcccagactttgtgcgtgga
ggacatgtccagtttaccgagccgagaggaggcttagaagcccgaacaataggtttaggc
ggtagtttcagccgttccaaggtggagaccaatggtgggtcgttcagtgggtcgtttcag
cacggtgaacctaaatcgtctatgacctttaaaatcacgaggaacgaccagcagaggctt
accattacccgttctactgacgatgccgacaaggcgaaaaacagcgtttcggtaagtggg
agcgtagcttcatcaaacgattattccgaatatacctataccgacctcaacggcgacggc
ttggcggatagggttactaaagacggctacatcagttataacacggggtacggcttttta
ccgcaagagcaatgggttggctttggcggattgctcacgggcgactcgcaagatttcagt
gcaggcttgggctattccgcttatggaggctcgtttacgggcgggcttaattataccaac
tccgttacacagagccgcacccagtttttagatatgaacggcgacggcttggcagaccgt
gtggtgtatggcgataataatacgctgatgtatcagaatttaggtaacacttgggatacg
acacctttggtcattcctaaagtagcaggcaatcctatcgccgtaaaccgagcgattagc
tacgggggcagtgccaagtattccgtgtatttcaaatgggggttcatcaaatttggcttt
acggcaggaggctttgcaggtaagagtaccagccgaatggaagcggcgtttatggatgtg
gacggcgatggcaatttagattacatcttgtccgatggcgaggacgacctccgtgtggcg
acttctaatatacgccgtaccaataggcttaaaagcgttaaaaatgccacgggcagcacc
tttgaggtcgattacgagtgggtggcgcctacttacgaaaaccctaacagcaagtgggtg
ctaagtagggtaaccacttttgacggacatcaaggcgatggcgaggactacaccatcagc
cgtttcacctataaagacccgtactacgaccgccgagagcgagagttttatggttttgcc
gaagtaaagcaagaacagctggaccctaaggacggcaaggtgctaagaacttccgtgcag
cactattataacagggactacttccgcaaatcgttggcgaaaaacagctataccttagac
gcccaagggcgaaaactcaccgaaagcaccgtgcagtatcagattaaaaacgcccgtacc
aataccgattgggaggcggagcgtttggcactgcctgaaagcgatgccatttcggtcttt
attgcccctacggaaaccaccgaacgccaatacgagggggcggggtatttggagcacaaa
atcgcccaaagctacgatgctaaggggaacatcaccacttaccaagactttggcacgggc
aatcccaactcggcactcaaagcggaaattacttattatgagagcgaaacgccctacttt
gggggcattgccaagagcatcacggtgcacgatgccaacggtttggtaaggaaacgcgag
gcggacatcaacccgcaaacggcagaaaccacccaaatccgcaactactttacggcagac
cgctacgcccgtaccgacttgtcttacgatgcgtacggcaaccttgcccaaatcacaggg
gcggaaaaccacaaaggggagcgttcgagccttcgctatgaatacgacgaagaaacgcac
agccacctaacgaaaattaccgaccattttggctacgaaacccgcacggcgtacgactac
cgctttaacgctccgttggaagttaccgaccgcaacggggagcaactgcactataccata
gacgctaaggggcgtaccacacacattctcgcgcctaaagaagcggcggcgggcgtgcct
tatacggtggcttacgactattatccggaagccaaagtgccttacgccaaaacaagaaac
tacgatgccgagcacggcaaagacatcatcacttatacctataccgacggcttagggcgt
acgctgcaagtcaagaaaacggcggcactgttccaagggaaaaaccaagccgatgccgag
cgtctcattgtatcgggcaaacaagtgtacgatgctttgggtcgggtggtagagagctat
taccctaccaccgaaacgccaagcgaggcgttcagcacccaagtagctacggtaatgcct
accactacggcttacgacgagaaagaccgcccagtattgcagaccctgcccgatggcagc
acggtagccacggcttacgaggtgtcggaaacagcaggcaccaagacccttaaaaccacc
gtaaccgatgcgttgggcagggtgtcccatagcgccaccgatgttttgggcagaacgctg
aaacaagtacaacctacggggatagaaaccacctaccactacaacgcccaaggcgaactc
ctaaaagtaaccgatgccgaagggcaccagaccctaagcgagtacgaccttttggggcgt
cgcacccaacttacgcaccccgatgcgggcatcaccacattggcgtacgatgcggcgggc
aacctcatacgccgtcagaccgcccaaattcgggagcagatgcccgatgcggcgatagaa
taccactacgaccacaaccgtttgcaggaaatccgctaccctaagcacccggagaacaat
gtccgctaccattacggtaagcagagcgagagccctcgccgtcggggacgcttgtggttg
gtggaggacgccagcggcggtaccgagtatttctacggaagtatgggcgaggttgaaaaa
gaaatccgctcgttacgcatcacgccgacggaggtgcacacctacatcaccgaatacggg
tacgacagctttaaccgtatccaaacgatgacttaccccgatggcgaagtcttggacttc
ggctacaatcgggcagggcagctcaccaccctcacggggaaaaagggcaactacgaatac
acctaccttaaacaacaagggtacgacgagtttgagcagaaagtgtatcgccagtacggc
aacggcaccgaaacccgttatacttatgaccctacaatgaggcgtttggcgacactcaac
acccaaaataccaaacgaaccttccaagacaaccgctatacttacgatttagtggggaac
atcttgcaggtggagaaccaagttccaatcgtgaattatgctttgggtggagcaagtagc
tatcaataccaatacgacgagcttaaccgtctgataagtgccacaggaacttacacaggt
gaggcgacttctgcggagtaccagctccaaatgcagtacaataagctcaacggtattgtt
caaaaatccttaacccataagcaaaacggtaaggataaaggctatgtgctggattatgtt
tatggcaataagtcccaccctcacgccctaagcgaacttaaagattctacgacaccgaag
ccaagggcttacgagtacgacggcaatggtaatccgataagctacgagggctttaaggac
tttagggtgatggtatgggacgaagaaaaccgtttgcagggattaaatgataacggtaag
ttgcatttatatacttacgaccacacaggcgaaagagccgtaaaaagtagtgcagagagc
caaaaaacggtgattaacggggtaagttccgccgtcatcgttcacgcggagaattacacc
gcttatgttaatccttattttgtagttaataagggtaagtttaccaagcattattttgaa
ggtacaagccgtattgtgtcaaaattgggagagggaacatttcatcaaccgtctggtata
aatgcaggaggaattgattatgtgaaacaatccgcaaaagtgcaggaagccatagaccaa
tacatcaaaggattaaacattccgccaggtccgccaacgcaacacggcatatacggcaca
cctgactttacaggacaagagtacccaagtatagattggtcagacattagccaagaccaa
gagccaccagagggttggccaagaccgccgaagtttaacgagccgggcgatgtgccgggt
ccgccagtacagtatggcgaccccgtgaaacccgataatgtgaaaggtgggtttggttat
gtagataatgggatagaggagaaaaacttgtatttctatcaccctgaccatttgggttca
agttcatacattacagacgctaatggcgatgtaaaccaacatacggaatatatggcgttt
ggcgaggtattatttgacgaacacaaggtaagtagaagaatgccgtatttgtttaacggt
aaagaattagattctgaaacagggttatactactacggtgcgagatattatgatgcgaga
gtaagtttgtggctcggtacagacccattgagtgggtacaatccaataatggaaacagag
cattatatagatggtcagcataacgggggagtatttaatccaatgaactttgctacctat
tcttatacttatcaaaatccaatactttatatagaccctaacggaaagcaaacatttttt
ctgcatactagaaattttgctccttttgatagatttggaggaggttttgagggagatggg
gataatagaaaattttcaacagcaaaaaatatgtcttatagaatagctggtactactacg
attaatttagataaatttactatgagtaatgttcgtggaggtaaagctcattctgattgg
ttaggaactagctttagtagtgcaatttctccgacaaatgttgattatagttatgcggat
aatggtagaaaaacccaaaattattatatgcatatttatggtaaaaataaagcattatta
tgggggattgtttcaccagatatagatacaaatgttaatctagaagtttctaatattaag
aaagggcaaagttttgatatttcaggaaatgtatatggtgataaatttccatcaaatgaa
acatatattactgataaaaaaggtaactctttgtttttaggagtttctggagcggatggt
tcaccttttacatctttagctggagataatgatagacctatgtctagttttaaatttaaa
gttttactaaataaagatgatacatttaggggtgtaagatataggggaaaagattataca
ggtagtcaatggaactcacaatttgagaaattaaatccaagagatggcaatgttcaatcg
ggaaaatcagcagaataa
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integrated database retrieval system
