Robbsia andropogonis: ACQUFY_10190
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Entry
ACQUFY_10190 CDS
T11408
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rand Robbsia andropogonis
Pathway
rand03030
DNA replication
rand03430
Mismatch repair
rand03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQUFY_10190 (holB)
03430 Mismatch repair
ACQUFY_10190 (holB)
03440 Homologous recombination
ACQUFY_10190 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rand03032
]
ACQUFY_10190 (holB)
03400 DNA repair and recombination proteins [BR:
rand03400
]
ACQUFY_10190 (holB)
Enzymes [BR:
rand01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQUFY_10190 (holB)
DNA replication proteins [BR:
rand03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQUFY_10190 (holB)
DNA repair and recombination proteins [BR:
rand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQUFY_10190 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
NACHT
nSTAND3
DNApol3-delta_C
VapE-like_dom
TsaE
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
XTR86133
LinkDB
All DBs
Position
1:complement(2171429..2172553)
Genome browser
AA seq
374 aa
AA seq
DB search
MLYPWQSASWNALTAQLQPNGRFAHALVIHGQAGIGKEAFARHLAQALLCEEGHGPHAMR
GRPCGQCPACHWFEQGNHPDFHAVYPENLAPPLPTSTDGDVSEKGGKAAKGKATDGDVGE
GDTKGKALSKEIKIEQIRALLTFCGIGAHRGGRRVVLVYPAEALNGAAANALLKTLEEPP
VGVMFLMVSANLDRLLPTIISRCRQWPLAGPDRALASEWLAAQPGVPSPMAARDALAQTG
GAPLAAHALFGDPHHAALLPLRDGLIQQWSAGAQCDAFACADAVQKTAVPIVLGWLQRWV
YDLASVTLTGQIRYFPAHATALRRCAMQADAMVLMQFQQALLRERMTEQHPLNARLVFES
LFVRYRAVFWLSPR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacccgtggcaatcggcatcgtggaatgcgttgacggcgcagttgcagccaaac
ggccggtttgcgcacgcgctggtgattcacggccaggccgggatcggcaaggaagcgttc
gcgcggcatctggcgcaggcgttattgtgtgaggaagggcacggtccgcacgccatgcgt
ggccggccttgtgggcaatgccccgcatgtcattggttcgagcaagggaaccatccggat
tttcatgcggtctatccggaaaatctggcgccaccgctacccacgtcgaccgatggcgac
gtttccgaaaaaggggggaaagcggctaaagggaaggcgaccgacggcgatgtgggcgaa
ggcgatacgaaaggcaaggcgctcagcaaggaaatcaagatcgagcagatccgcgccttg
ttgacgttctgtgggattggcgcgcatcgcggcggccgacgcgtggtgttggtgtatccc
gcggaagcgttgaatggcgccgcggccaacgccttgttaaagacgctggaggagccgccc
gtcggcgtcatgttcttgatggtcagtgccaatctggaccgattgctgcccacaatcatc
agccgctgccgacaatggccattggccgggcccgaccgtgccttggccagcgaatggctg
gcggcacaaccgggcgtaccgtcccctatggcggcgcgcgacgctttggcgcaaaccggc
ggggcgccactcgcggcccatgcattatttggcgatccgcaccatgccgcgctgttgcca
ttgcgcgatggattgatccagcaatggtccgctggcgcgcaatgcgacgcatttgcctgt
gccgatgcggtgcagaagacggcggtaccgatcgtactcggttggttgcaacgatgggtg
tacgacctggccagcgtcacgttgacagggcaaatccggtattttcccgcgcatgccacc
gcgctgcgccgttgtgccatgcaagccgatgcgatggtgctgatgcagttccagcaggcc
ttgctgcgtgaacggatgaccgagcagcacccattgaacgcgcgattggtgttcgaatcg
ctgttcgttcggtaccgcgccgtgttttggctgtcgccgcgctga
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