Robbsia andropogonis: ACQUFY_11845
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Entry
ACQUFY_11845 CDS
T11408
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rand Robbsia andropogonis
Pathway
rand03030
DNA replication
rand03430
Mismatch repair
rand03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQUFY_11845 (dnaE)
03430 Mismatch repair
ACQUFY_11845 (dnaE)
03440 Homologous recombination
ACQUFY_11845 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rand03032
]
ACQUFY_11845 (dnaE)
03400 DNA repair and recombination proteins [BR:
rand03400
]
ACQUFY_11845 (dnaE)
Enzymes [BR:
rand01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQUFY_11845 (dnaE)
DNA replication proteins [BR:
rand03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQUFY_11845 (dnaE)
DNA repair and recombination proteins [BR:
rand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQUFY_11845 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
XTR86408
LinkDB
All DBs
Position
1:complement(2503132..2506860)
Genome browser
AA seq
1242 aa
AA seq
DB search
MSEPRFIHLRLHSEYSIADGIVRLDDAIAAAAKDGQGALALTDLSNAFGLVRFYKAARSA
GVKPIAGADVWITNPADRDKPHRLLLLVRNRQGYLNLCELLSRGSLTNQYKGRAEIRSEW
LANGFAEGLLALSGAQGGDIGAAFAAGNPEAARRCAIYWQTVFPDAFYIELQRGGQPGEQ
SYIAQALALAASLNLPVVATHPVQFMTPDDFTAHEARVCISEGDLLANPKRGKRFTQTQY
FQTQAAMAALFADLPSALDNTVEIAKRCNLTLELGKPKLPLFPTPDGVSLDDFLVAESRA
GLEKRLAFLYPDEARRESERPRYAARLEFEANTIIKMGFPGYFLIVADFINWAKTNGVPV
GPGRGSGAGSLVAYALGITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYV
KRKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYNFTDSVAKLIPFKPGKHVTLEDAMK
EEPQLAERYDAEEEVRQLFDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGPAGE
GEESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLAQVPLTD
PASFHILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARK
HGRENVDYPDPRVESVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEM
AEHRALFADGAAKNGLSAEKAGEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPA
EFMAANMSLAMDDTDKVKILYEDCISATNNLKVLPPDINLSAYRFEPVAEAPDADGKLQR
SRTIRYGLGAIKGSGQNAIEEIIRARDERPFRDLFDFCERVDRRVVNRRTVETLIRAGAF
DALHDNRAQLLASVPLAMEAADQAAANALQVGLFDLGGEAPPHELIKTAPWNDKRRLQEE
KSSLGFYLSGHLFDAYKTEARRFTRQTIGELTEGRDKIIAGIIVSLRTQMTQRGKMVVAL
LDDTTGQCEITIFNELFDANRELLKEDELLVVSGSARNDAFTGGLRFTAESLMDLERARS
RYARAVRLSVRGIGAAGEACSIGGKCTTVVNGEVGSRSGSGNVQPTADIARLKDILVTYR
APDMMVTATEGTFAEADAGGYRAGGNGLGGRQGGGFGGGAGRGRQSRDVAPARTGLRVEI
RYVGKDAYTELALGHAWCVKPNDELMSALAVAFGRDAAEISY
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacctcgttttattcatctccgcctccactccgaatattcgatcgcagacggt
atcgtccgcctcgatgacgcgatcgctgctgccgcgaaagacggccagggcgcgctcgcg
ctgacggatctcagcaacgcgttcggtctcgttcgcttctacaaggccgcgcgcagtgcg
ggtgtcaagccgattgctggcgccgacgtctggatcacgaatccggccgatcgggacaag
ccgcatcggctgctgctcctggtacgcaatcggcagggatatctgaacctgtgtgagctg
ctgtcacgaggctcactgacgaaccagtataaaggccgtgccgagatcaggtcggaatgg
ctggcgaacggttttgccgagggtctgctggcgttgtccggcgcgcagggcggcgatatc
ggggcggcgtttgccgcgggcaatcccgaggcggcgcggcgttgcgcgatatattggcaa
acggtgtttccggatgcgttttatattgaattgcagcgtggcggacagccaggcgagcaa
tcgtacatcgcccaggcgctcgcccttgccgcctcgctgaatctgcccgttgtcgccacg
cacccggtgcagttcatgacgccggacgatttcacggcgcatgaggcacgtgtctgcatc
tcggaaggcgatctgctggcgaatccaaagcgcggcaaacgctttacgcagacacagtat
ttccagacgcaggccgctatggcggcgttgttcgccgatttgccgtccgcgctcgacaat
acggttgaaatcgccaagcggtgtaatctgacactcgaactcggcaaaccgaagctgccg
ctgttccctacccccgatggcgtgtctctcgacgactttctcgtggcggagtcgcgcgcg
ggcctagaaaagcggctggcgttcctgtatccagatgaagcgcggcgtgaatccgagcgc
ccgcgctatgcggcgcgtctcgaattcgaggcgaataccatcatcaagatgggctttccg
ggttacttcctgatcgttgcggacttcatcaattgggcgaagaccaacggcgtgccggtg
ggaccgggtcgaggatcgggtgcgggttcgctggtcgcgtacgcgttggggatcacggac
ctcgatcccctcgaatacaacctgctgttcgagcggttcctgaatccggagcgggtatcg
atgcccgacttcgacatcgatttctgccaggaaggccgcgatcgtgtgattcagtatgtc
aagcgcaagtacggtgccgacgcggtgtcgcagatcgccactttcgggacgatggcggca
aaggccgccgtgcgcgacatcgggcgggtgctggatctcggctacaacttcaccgatagc
gtcgccaagctgataccgttcaagccgggcaagcacgtcacgctagaagacgcgatgaag
gaagagccgcaattggccgagcggtatgacgcggaagaagaggtgcgccagctgttcgac
cttgcccagcgcgtcgaaggactgacccgaaatgtcggcatgcatgcgggcggcgtcttg
atcgcgccgggcaagctgacggatttttgcccgctttacacgcagggccccgccggcgaa
ggcgaggagagcggggtcgtcagccaatacgacaaggatgacgtcgaagcggtggggttg
gtcaagttcgacttcctgggtctgaccacgctgaccatcctggattgggcagagcgctat
atccgccgactcgacccgtcgaaggcagattggtcgttggcacaggtgccgctgacggac
cctgcgtcgttccatatcctgaaaaaggcgaatacggtcgccgtattccagctggaaagc
cgcggcatgcagggcatgctgaaagatgcgcagccggaccgtttcgaggacatcatcgcg
ctggtggcgctgtatcgtccgggcccgatggatctgattccgagtttctgcgcccgaaaa
cacggtcgcgagaatgtcgattacccggacccacgcgtggagtccgtgctcaaggagacc
tatgggatcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggaggctac
tcgctgggtggcgccgatctgctgcgtcgggcgatggggaagaagaaggccgaggagatg
gcggagcatcgggcattgtttgccgatggtgccgcgaaaaacggcctgagcgcggaaaag
gccggtgaaattttcgatttgatggaaaagttcgccggctacggtttcaacaagtcgcat
gccgccgcctatgccttgctggcctattacacggcatggttgaaggcgcaccatccggcc
gaattcatggcggccaatatgagcctcgcgatggacgacaccgataaggtgaagatcctg
tacgaggactgcatcagcgccacgaacaacttgaaggtgctcccgccggacatcaacctt
tccgcctatcgctttgagcctgtcgcggaggcgccggacgcggatggcaagctgcaacgg
tcgcgaaccattcgatacggtctgggtgcgatcaagggtagcgggcaaaacgccatcgag
gaaattatccgtgcgcgtgatgaacggccgttccgcgatctgttcgatttctgcgagcgc
gtggaccgacgcgtcgtcaatcgtcgaaccgttgaaacgttgatccgcgcgggcgccttc
gatgcattgcacgacaaccgggcgcagctactggcttccgtcccgttggcgatggaagcc
gccgatcaggcggcggccaacgccttgcaggttgggttgttcgatctgggcggggaagcg
ccgccgcacgaactgattaaaaccgcgccatggaacgacaagcgccgcttgcaggaagag
aagtcatcgcttggcttctacttgtcggggcatttgttcgacgcgtacaagacggaggcg
cgtcggttcacgcgtcagaccatcggcgagttgaccgaagggcgcgacaagatcattgcc
gggatcatcgtcagcttgcgtacccagatgacgcaacgtggaaaaatggtggtggcgctg
ctcgatgacaccaccggtcagtgcgaaatcacgatttttaacgagcttttcgacgcaaat
cgtgaactgttgaaagaagacgagttgctggtggtcagcggcagtgcacgcaatgacgca
ttcacgggtggtcttcgctttaccgcggagtcgttgatggatctcgagcgcgcacgaagc
cgctatgcccgggcagtacgactgtcggtgcgtggtatcggcgccgcaggcgaagcatgc
agcatcggtggcaaatgcaccacagtggtgaatggcgaggtgggaagtcgatcggggagc
ggaaacgtgcagccgaccgcggacatcgcacgtctgaaggatattcttgtcacctatcgc
gcgcccgacatgatggtcacggcaacagagggtacgttcgccgaggcggatgcaggcggc
tatcgagccggtgggaatgggttgggtggcaggcaggggggcggctttggtggcggggcg
ggtcgtggccgacagtcgcgcgatgttgcgccggcgcgcacgggtttgcgggttgagata
cgctatgtaggcaaagacgcttatacggagctggcgctcggccacgcgtggtgcgtgaaa
ccgaacgatgaattgatgtcggcgctggcggtggcattcggccgggatgcagcggaaata
tcctattga
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integrated database retrieval system
