Robbsia andropogonis: ACQUFY_11860
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Entry
ACQUFY_11860 CDS
T11408
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rand Robbsia andropogonis
Pathway
rand03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rand00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQUFY_11860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rand03019
]
ACQUFY_11860
Enzymes [BR:
rand01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACQUFY_11860
Messenger RNA biogenesis [BR:
rand03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACQUFY_11860
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
XTR86409
LinkDB
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Position
1:complement(2508937..2510664)
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AA seq
575 aa
AA seq
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MSESGIFPVHGSGENATPSETDNTNAASASFVKAAPSTVAPPPETGTELPASPAADDVAP
VISHVGDVVETVPAVVPDAVTFATFGLHPKLLQAVTEQGYTKPTPIQARAIPVVLTGSDL
MGAAQTGTGKTASFSLPIIQRLMPQANNSTSPARHPVRALILTPTRELADQVADNVAAYA
KHTDLRSLVVFGGIDMQGQAQALRGGVEILVATPGRLLDHVQQRNVQLGQVQMLVLDEAD
RMLDMGFLPDLQRILNLLPENRQTLLFSATFSNDIKKLASTYLRNPTTIEVARNATASTV
RQILFEVDEADKPRAVTQLIRARDLKQVIVFCNSKLGAGRLARTLEHDGIVASAIHGDKS
QSERMQALEAFKKGSLAVLVATDVAARGLDVTDLPAVINYDLPFNAEDYVHRIGRTGRTG
RAGASGDALSLCSSKDLRLLADIEKMIGRPLQRETLMLPASPARERGDRSPRDGRASSLR
EPRDGADAHSRREGASGHQGRGLYGDGSGRGTDRRPRRHAPIDDIFTRPYEPMVKPTDAS
SATASDASLDHGKRTTAKRPLAALLGGLGMPRKPD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcaggaatttttccggttcacggcagcggcgagaacgccacgccgtccgag
accgataacacgaacgccgcatccgcatcgtttgtaaaggccgctccgtccacggttgct
cctccaccagagacgggtaccgaactgcctgccagtccggccgcggatgacgtggcgcca
gtaatctcgcacgttggtgacgtggtggaaaccgtcccggcggtggtgcccgatgcggtg
acgttcgcaacgttcggcttgcatccgaaactgcttcaggcggtgaccgagcaaggctac
acgaagcccacgccgatccaggcgcgcgcgatcccggtggtgctcacgggcagcgacctg
atgggcgcggcgcagacgggtaccggcaagacggccagtttctcgttgccgatcatccag
cggttgatgccgcaggcgaacaacagcacctctcccgcgcgccatccggtgcgcgcgttg
atcctgacgccgacgcgtgagctcgcggaccaggtggcggacaatgtcgcggcctatgca
aagcatacggacctgcgcagtcttgttgtgttcggcggtatcgacatgcagggccaggcg
caggcactgcgaggcggtgtcgagatcctggtggcaacgccgggtcgcctgctcgatcac
gtgcagcagcgtaatgtgcaattgggccaggtacagatgctggtgctggacgaggcggac
cggatgctcgacatgggcttcctgcccgacctgcagcgcatcctgaatctgttgcctgaa
aaccgccagaccttgttgttttcagcaaccttttcgaacgatatcaagaagctggcgtcg
acttacctgcgtaatccgacgacgatcgaagtggcgcgtaatgcgaccgcatcgacggtc
cgccaaatactgttcgaggtggacgaagcggacaagccgcgggcggtgacgcagttgatc
cgcgcgcgtgatctgaagcaggtcattgtgttctgcaacagtaagctgggggcgggtcgt
ctggcgcggaccctcgagcatgacggcatcgttgcttcggcgatccacggcgataagtca
cagagcgaacgcatgcaggcgctggaagcgttcaagaaaggctcgttggcggtcttggtc
gccaccgacgtggcggcacgtggactggatgtgaccgatttgcccgcggttatcaactac
gatttgccgttcaatgcggaagattatgtgcaccggattggccgcaccggtcgcaccggt
cgcgccggtgcgtcgggcgacgcgttgtctttgtgttcgagcaaggatctccgcctgctc
gcggacattgaaaaaatgattggacgtccgctccaacgcgagacgctcatgctgcccgca
tcgcctgcgcgtgagcgcggtgatcgatcaccgcgcgatggccgagcgagcagtctgcgc
gaaccccgtgacggcgccgatgcccattcgcgccgcgagggtgcgtctgggcatcaaggc
cgtggcctctacggggatgggtcgggccgtgggacggatcgtcgtccgcgacgtcacgct
cccatcgacgacatcttcactcggccgtatgagccgatggtgaagccaacggatgcatcc
agtgcaacagcgtctgacgcgtcgctggatcacggcaagcgcaccaccgcgaagcggccg
ctggcggccttgctcggcggcctgggtatgccgcgcaagccggactga
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