Robbsia andropogonis: ACQUFY_15995
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Entry
ACQUFY_15995 CDS
T11408
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rand Robbsia andropogonis
Pathway
rand03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACQUFY_15995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rand03400
]
ACQUFY_15995
Enzymes [BR:
rand01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACQUFY_15995
DNA repair and recombination proteins [BR:
rand03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACQUFY_15995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
AAA_22
nSTAND3
AAA_28
HerA_C
AAA_25
NTPase_1
SLFN-g3_helicase
UvrD_C
AAA_18
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
XTR87084
LinkDB
All DBs
Position
1:complement(3433940..3436924)
Genome browser
AA seq
994 aa
AA seq
DB search
MSGVRDSDKKGRTTRKPTHQGDARARDDVQAQAQMAFTFAQEPDLGLAMAPSSATAEPKS
ITPPKPASEPQPIIEPEPPSERDADVPPNVLVLSGAEMLVILRDWARRGWLRELDRAFAA
FLMEQVPAAPALLLLGAALASHQLGRGHVCVTLADTLHDPRFALSLPPEESAAFQASGAV
LASSDGTSWGGPPMRGAPFNHVADDARALDTFARRVAERALTPEVLLNGIDVAVWRSALL
VPGLVTRVATSTMPAMSHVASAMAFFDPPPDAASPLVLVETDEGDARLYLRRYWRYEQAV
RTAIFQRVAAPTSRTGATTDGTLRALLNCLFPPSGRLPTDVTDWQKLACALMTRQRFGVI
TGGPGTGKTTTVVRLLALLQCLALSDGGVSGVPPAQTADASMATRHGTADGPHRRGRALR
IRLAAPTGKAAARLNDAISRAVASLPLCDLAALLPPTTHGEGASFPAHVDIATAAHPDST
NAIVARLRAAIPTEVTTLHRLLGSRPDSRRFRHDADTPLALDVLVVDEASMVDLEMMAAV
LAALPTGARLILLGDKDQLASVEAGAVLGELCARAQQGHYTPETCAWIASATGASIDASL
RDPDGAPLDQAIAMLRHSHRFTADSGIGRLAHAVNEGDARALREIRATPYPDLAYVALSP
ASDVDATVFRNLVIHGGVSDADVSMNGTLASAADTPASRSGYARYLRVLREQAPHGALTA
DGTAPGVAVPIPDARHGLHSGTSAFGEARHDRVTSSHPFNVVRDDYDNWARAVLDAYGGF
QMLCALRRGEWGVDGLNDRIARTLHEAGLIALPSMRQVRAPTPWYVGRPVLVTRNDYGLG
LMNGDIGMTLIGPPSDPANVISTVDDTGATIKPGTPPFAAQTGMYERAGQGLSRLRVAFL
ASDGSRAVKWVLPSRLQAVETVFAMTVHKSQGSEFAHAALVLPPRMNPILTRELVYTGMT
RARQWLTLASAARDDHVLMQSIERRVLRASGLMR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtgcgcgatagcgacaagaagggccggacgacgcgtaagccgacgcatcaa
ggcgatgcgcgcgcgcgggacgatgttcaagcgcaggcgcaaatggcgttcacattcgcc
caggagccggatctcggcctagccatggcaccgtcgagcgcgaccgccgaaccgaaatcg
atcaccccaccgaagcccgcctccgaaccgcaaccgattattgaaccggagccccccagc
gagcgagacgctgacgtgccgccgaacgtgctcgtcttatcgggcgcggagatgctggtg
atccttcgtgactgggcgcgacgcggttggctgcgggagttggaccgtgcctttgccgcc
tttctcatggagcaggtgcccgccgcgccggcgttgctgctgctgggcgcggcgctggcc
agtcaccagctcgggcgaggccatgtttgcgtgacgctggccgataccttgcacgatccg
cgttttgccttgtccttgcctcccgaggaaagcgccgcgtttcaggcgtccggtgccgtg
ctcgcttcatcggatggcacgtcctggggcgggccaccaatgcgtggcgcaccattcaac
catgtggccgatgacgcgcgcgcgctggatactttcgcgcggcgcgttgcggaacgagcg
ctaacgccggaagtgctgctgaatggtatcgacgtcgcggtctggcgttcggccctgctc
gtgccgggcctggtcacacgcgttgcgacatcgacgatgcccgccatgtcgcatgtcgca
tcggcaatggcatttttcgatccgccacccgacgcggcttcgccactcgttctggtggag
acggacgagggcgatgcgcgtttgtatctacgtcggtattggcggtacgagcaagcggtc
cgcaccgccatcttccagcgggtcgccgcgcccacatcgcgaaccggcgcaacgaccgac
ggcaccttgcgtgcgttgttgaactgtcttttccctccgtccggacgcttgcccacggac
gtcaccgattggcaaaaactggcgtgtgcattgatgacgcgtcagcgtttcggggtcatc
accggcggtcccgggaccggcaagacgacaacggtcgttcgtctgctcgcgttactgcaa
tgtctcgccctgtcggatggcggcgtatccggcgttcctccagcgcagacggcggatgca
tcgatggcgacccgtcatggcacggccgatggcccgcatcgccgcggccgtgccttgcgc
atacgccttgccgcgcccaccggcaaggcggcggcgcgcctcaacgacgccatttcccgc
gcggtggcatcgctaccattgtgcgaccttgccgcgctattgccccccacgacgcacggc
gagggtgcgtcattcccggcgcacgtcgatatcgccactgccgcccatcccgattcgacc
aacgccatcgtggcgcgcttgcgggccgcgatacccaccgaggtgaccacgttgcatcgg
ttgctggggagccgccccgacagccgacgtttcagacatgatgccgatacgccgctggcg
ctggacgtattggtcgtcgacgaagcgtcgatggtcgatctcgaaatgatggccgccgtg
cttgctgcattgccgacgggtgcgcggttgattctgctgggggacaaggatcaattggcc
tcggtggaggccggcgcggtgctcggcgaactgtgtgcacgcgcgcagcaaggtcattac
acgcccgagacttgcgcatggattgcctccgcgacgggcgcatcgatcgatgcgtcgttg
cgcgatcccgacggcgccccgctggatcaagccatcgcgatgctccggcatagccatcgc
ttcacggcggacagtggtattggtcgcctggcccacgccgtgaacgagggagatgctcgc
gcgctgcgcgagatccgcgcgacaccgtatccggatcttgcatacgtcgcgctgtcaccg
gcgtccgacgtggatgcaacggttttcaggaatctcgtgatccatggcggggtctcggat
gccgatgtgtcgatgaacggcacgctggcgtcggcggcggatacgccagcgtcgcggtcc
ggctatgcgcgttacctgcgcgtattacgggagcaagccccgcacggggcgttaaccgcc
gacggcacggcaccaggcgtggcagtgccaatacccgatgcgcgccatggtctgcactca
gggacatccgcattcggggaggcgcgccatgatcgggtaacgtcgtcgcatccgttcaat
gtcgtgcgcgatgattacgacaactgggcgcgcgccgtgttggacgcctacggtggtttt
caaatgctttgcgcgctgcggcggggcgaatggggcgtcgatggtttgaacgatcgcatt
gcaaggacgctgcatgaagcgggtttgattgcgttgccatcgatgcgtcaagttcgcgcg
cctacgccgtggtacgttggacgtccggtactggtgacacgcaacgattacgggctgggg
ctgatgaacggcgacattggcatgacgttgatcgggccgccctccgatccggcgaacgtc
atatcgacagtcgatgacacgggagcaaccatcaagccaggcacgcccccgtttgccgcg
cagacgggcatgtacgagcgtgccgggcagggattgagtcgattacgtgtggcttttctt
gcaagcgatggcagtcgcgcggtcaagtgggtgcttcccagccgattgcaggcggtggaa
acggtgtttgccatgaccgtacataaatcccagggctcggagtttgcccatgcggccctt
gtcctgccgccccggatgaatccgatcctgacccgtgaattggtgtacaccggcatgacg
cgcgcccgacaatggctcacattggccagcgccgcccgtgacgaccatgtgttgatgcag
tccatcgagcggcgtgtgctccgcgcgagcggcttgatgcgctaa
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