Robbsia andropogonis: ACQUFY_16360
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Entry
ACQUFY_16360 CDS
T11408
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rand Robbsia andropogonis
Pathway
rand03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rand00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACQUFY_16360 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rand03021
]
ACQUFY_16360 (rpoC)
03400 DNA repair and recombination proteins [BR:
rand03400
]
ACQUFY_16360 (rpoC)
Enzymes [BR:
rand01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACQUFY_16360 (rpoC)
Transcription machinery [BR:
rand03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACQUFY_16360 (rpoC)
DNA repair and recombination proteins [BR:
rand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACQUFY_16360 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XTR87153
LinkDB
All DBs
Position
1:complement(3504394..3508641)
Genome browser
AA seq
1415 aa
AA seq
DB search
MKALLDLFKQVQQDEVFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVIEPGMTPLKRGQIMTEEDYYAKVEEYGDEFRAEM
GAEGVRELLRSIDIDAQAEMLRAELKATGSEAKIKKFARRLKVLEAFQRSGIKPDWMVME
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMQGPNKRVLKSLTESIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLELMGVATTIKAAKKEVESQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNGKGEGLTFTGVSEVIRAYENK
EVELASRVNVRITEQVANPDKSDGQPAFVPKISLYATTVGRSILSEILPPGLPFSVLNKP
LKKKEISRLINTAFRRCGLRETVIFADALMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLATEPVVDRDGNTVQ
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVVVSEVVNPETQETLYHVGDLLDEDAVEEIERLGIDEVRVRTPLSCETRFGLC
ALCYGRDLGRGYRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSIEAKSN
GTVRFTATMRYVTNGKGEQIVISRSGEVMITDDLGRERERHKVPYGATLLQLDGAQIKAG
TQLATWDPMTRPIITEHGGTVKFENVEEGVTVAKQIDDVTGLSTLVAIDSKRRSAQAGKT
LRPQVKLLDEKGAEVKIPGTDHSVTVSFQVGALITVKDGQQVHVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTVSFGKDTKGKQRLVITDLDGNPHEFLIAKEK
QVLVHDGQVLNKGEMVVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIVDAGDTRFIPGEQVERSDMLDENDKMIAEDKRPCVYDNVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKEA
ADRERHDQIAAADAYDYPLDDAAPVESSTTQPSEG
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctgctcgatctattcaagcaagtccagcaagacgaagtattcgacgcgatc
aagattggcctcgcgtcgcccgagaagatccggtcctggtctttcggcgaagtcaaaaag
ccggaaacgatcaactaccgtacgttcaagccggaacgggatggcctgttctgcgcgaag
atctttgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgaaaaatgcggcgttgaagtcacgctggcgaaagtgcgtcgcgaa
cgcatgggccatatcgaactggcttcgccggtcgcgcatatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtcctggacatgacgctgcgcgacatcgaacgcgtgttgtac
ttcgaggcctttgtcgtcatcgaaccgggcatgacgccgctgaagcgcggccagatcatg
accgaggaagattactacgcgaaggtcgaggaatatggcgacgaattccgtgccgaaatg
ggtgcggaaggcgtgcgtgaactgctgcgttcgatcgacatcgatgcgcaggcggaaatg
ctgcgtgccgagttgaaggcaacgggttccgaagccaagatcaagaagttcgcgcgtcgt
ctgaaggtgctggaagcattccagcgctcgggcatcaagccggactggatggtcatggaa
gtgctgccggtgctgccgccggagctgcgtccgctcgtcccgctggacggtggccgtttc
gcgacctcggacctgaacgacctgtatcgccgcgtcatcaaccggaacaaccggttgaag
cgtctgctcgagctgaaggcgcctgaaatcatcgtccgcaacgaaaagcggatgctgcag
gaagctgtcgactcgttgctcgataacggccgccgcggcaaggccatgcaaggcccgaac
aagcgcgtgctgaagtcgttgaccgaaagcatcaagggtaagggcgggcgtttccgtcag
aacttgttggggaagcgcgtcgactattcgggccgttcggtcatcgtggtgggtccgacg
ttgaagttgcaccagtgcggcctgccgaagctgatggcgcttgagttgttcaagcccttc
atcttcaacaagctcgaactgatgggcgtcgcgaccacgatcaaggccgcgaagaaggaa
gtcgaaagccagacgccggtggtgtgggacatcctcgaagaggtgattcgcgagcacccg
gtgatgctgaaccgcgcgccgacgctgcaccgtctgggcatccaggcgttcgagccggtg
ctgatcgaagggaaggccatccagctgcacccgctggtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgtgcacgtcccgctgtcgctggaagcgcagttggaagca
cggacgttgatgctggcatcgaacaacgtcttgttcccggcgaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacgcgtgaagccgtgaacggt
aagggcgaaggcctgactttcacgggcgtctccgaagtgatccgcgcgtacgagaacaag
gaagtcgaactggcttcgcgcgtcaatgtccggatcaccgagcaggttgcgaatccggac
aagagcgacggtcagccggcgttcgtgccgaagatctcgctgtacgcgacgactgtcggc
cgttcgatcctgtcggaaattctgccgccgggcttgccgttctccgtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaatacggctttccgccgttgcggcctgcgt
gagacggtgatcttcgccgacgcgctgatgcagtccgggttccgtctggcaacgcgcgcc
ggtatttcgatctgcgtggacgacatgctcgtgccgccgcagaaagagacgatcgtcggc
gatgccgcgaagaaggtgaaggaatacgatcgccagtacatgtcgggtctggtgaccgcg
caggaacgctacaacaacgtggtcgacatctggtcggcaacgtcggaagcggtcggcaag
gcgatgatggagcagttggcaaccgagccggttgtcgaccgtgacggcaacaccgtgcag
caggaatcgttcaactcgatctacatgatggccgactcgggtgcccgtgggtcggcggtg
cagattcgtcagttggcaggtatgcgcggcctgatggccaagccggatggctcgatcatc
gagacgccgattaccgcgaacttccgcgaaggcttgaacgtgctgcagtacttcatctcc
acccacggtgcccgtaagggtctggcggatacggcgttgaagacggcaaactccggttac
ctgacgcgtcgtctggtcgacgtgacgcaggatctggtggtggtcgaggacgattgcggt
acgtccaacggcgtggcgatgaaagcactcgtcgagggcggtgaggtggtggaagcactg
cgtgaccgtatcctcggccgcgtggtcgtgtcggaagtcgtgaacccggaaacgcaggaa
acgctgtaccacgttggcgacttgctggacgaagacgctgtcgaggaaatcgagcgcctg
gggatcgacgaggtgcgcgtgcgtaccccgttgagctgcgaaacgcgtttcggtctctgc
gcactgtgctacggccgtgacctgggccgtggctatcgcgtgaacgtcggcgaggcggtg
ggtgtgatcgcggcacagtcgatcggtgagcccggtacgcagttgacgatgcggaccttc
cacatcggcggtgcggcatcgcgtgcggcagtcgcatcgagcatcgaggcaaagtcgaac
ggtacggtgcgctttaccgcgacgatgcgctacgtgacgaacggaaagggcgagcagatc
gtcatctcccgttcgggcgaagtcatgatcacggacgatctgggccgtgagcgtgagcgc
cacaaggtgccgtacggcgcgacgctgttgcaactggacggcgcgcagatcaaggccggg
acgcagttggctacgtgggacccgatgacgcgcccgatcatcaccgagcatggcggtacg
gtgaagttcgagaatgtcgaggaaggcgtgacggtcgcgaagcagatcgacgatgtaacg
ggtctctcgacgctggtggcgatcgactcgaagcgtcgcagcgcccaagcgggcaagacg
ttacgtccgcaggtcaaactgctcgacgagaagggcgccgaagtgaagatcccgggcacc
gatcactcggtgaccgtgagcttccaggttggcgcgctgatcaccgtgaaggatggccag
caagtacatgtgggtgaagtgctggcgcgtatcccgaccgaagcgcagaagacgcgtgac
attaccggcggtttgccgcgggtggccgagttgttcgaagcgcgatcgccgaaggatgca
ggcatcctggccgaagtgaccggtaccgtgtcgttcggtaaggacacgaagggcaaacag
cgtctggtgatcacggatctcgatggcaatccgcatgagttcctgatcgcgaaggaaaag
caggtactggtgcacgacggccaggtcctgaacaagggtgaaatggtggtcgacggtccg
gccgacccgcacgatatcctgcgtttgcaaggtatcgaggcgttgtcgcgttacatcgtc
gacgaagtgcaggacgtgtatcgtctgcagggcgtgaagatcaatgacaagcacattgaa
gtgatcgttcgccagatgctgcgtcgtgtgcagatcgtcgatgccggcgacacccgtttc
atcccgggcgagcaggtagagcgttccgacatgctggacgagaacgacaagatgatcgca
gaggacaagcgtccttgcgtctacgacaacgtgctgctgggcattacgaaggcatcgctg
tcgacagactcgttcatctcggcggcatcgttccaggaaacgacgcgcgtgctgacggaa
gccgcgatcatgggcaagcgcgacgatctgcgcggtctgaaggaaaacgtgatcgttggt
cgtctgatcccggcgggtacggggctggccttccacaaggcccgcaaggcgaaggaagcc
gccgatcgcgagcgtcacgaccagatcgcggccgcggacgcgtacgactacccgctggac
gatgcggcgccagtcgaatcatcgacgacgcaaccgtccgaaggttga
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integrated database retrieval system
