Robbsia andropogonis: ACQUFY_19600
Help
Entry
ACQUFY_19600 CDS
T11408
Name
(GenBank) TCP-1/cpn60 chaperonin family protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rand Robbsia andropogonis
Pathway
rand03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rand00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQUFY_19600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rand03019
]
ACQUFY_19600
03110 Chaperones and folding catalysts [BR:
rand03110
]
ACQUFY_19600
03029 Mitochondrial biogenesis [BR:
rand03029
]
ACQUFY_19600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rand04147
]
ACQUFY_19600
Enzymes [BR:
rand01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACQUFY_19600
Messenger RNA biogenesis [BR:
rand03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACQUFY_19600
Chaperones and folding catalysts [BR:
rand03110
]
Heat shock proteins
HSP60 / Chaperonin
ACQUFY_19600
Mitochondrial biogenesis [BR:
rand03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACQUFY_19600
Exosome [BR:
rand04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACQUFY_19600
Exosomal proteins of other body fluids (saliva and urine)
ACQUFY_19600
Exosomal proteins of breast cancer cells
ACQUFY_19600
Exosomal proteins of colorectal cancer cells
ACQUFY_19600
Exosomal proteins of bladder cancer cells
ACQUFY_19600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XTR88994
LinkDB
All DBs
Position
2:619851..621356
Genome browser
AA seq
501 aa
AA seq
DB search
MAVTSVRVITGSAARRVLQRSLSEAVRAIGGSLGPSSKRLMYDAGTAGVLQASDGLSIAR
QVCPEQGVKSVAPKLLKETLWEVQRDLHDGTARVACMVDGAYGEALRHVAHGMAPIKLGR
AIERVARRLPALLAMQRCPMPSRAAIAASACDDDALAHRVAELFAYLPEEGALEIIAGVE
PGIVVERFSGYCVDVGDAVIGPTALQQRQRFALHAVHVLVVNEVLDDFGPLLPVLEQFVS
RAKSLLIVARGFTGAARAVLSANHQALTLHVIGVTLADVAMHAVGVLEDLCVVTGATLVS
EETGTTMASVRPAMLGRVESVVIENGRAVFAQAEGEVAAVLARRQDLERDAQRQRHVSLD
RERLLRRAARLRGGWAQMRVAGRTMWETEAFLVQARAALHALRASEADGVVPGGGKALER
LADMMQSDSAMRSVATPPDEIEWAAIQVVAAACRAVRRQIVLNDGAFGERTVVDPLCTTT
DLLRRSLSLTTALIGIEVLIA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgacttctgtacgagtaatcactggttcggcggcgcgtcgggttttacaacgc
tcactaagcgaagcggtacgggcgataggtgggtcgttggggccgtcgtcgaagcgcttg
atgtacgacgcaggaacggccggtgtccttcaggcaagcgatggtctctcgattgcccgg
caggtatgtcctgaacagggggtcaaatccgttgcaccgaagctgttaaaggaaacgctg
tgggaagtacagcgagacctccatgacggcaccgcgcgtgtcgcctgcatggtggatggc
gcgtatggggaggcgcttcggcatgtggcgcatggcatggcgccgatcaagctaggtcgt
gcgatcgagcgcgtcgcgcggcgtctaccggcgcttctcgccatgcaacgctgtccgatg
ccatcgcgtgcggcaattgcggcctcggcctgcgacgacgacgcgcttgcacatcgtgtt
gctgaacttttcgcgtatttgcccgaagagggggcgttggagatcatcgctggcgtcgag
ccgggcattgttgtggaacgtttctcgggttactgcgtcgacgttggcgatgccgtgatc
gggccaacggccttgcaacagagacagcggtttgcattgcatgcagtacatgtcctggtt
gtaaatgaggtgctggatgatttcgggccgttattgcctgtgctcgaacaatttgtctcg
cgagccaaatcgctgctgattgtcgcgcgaggatttaccggtgcggctagagcggtgctg
agtgcgaatcatcaggcgctgaccttgcatgtgatcggggtcacgcttgccgatgtggcg
atgcatgccgttggcgttctggaggatttatgcgtcgtaaccggagcgacgcttgtgagt
gaggagacgggtacgaccatggcatcggtcaggcctgcgatgttgggccgtgttgaaagt
gtcgtcatcgaaaatggtcgtgctgtatttgcgcaagctgagggagaagtcgccgctgtc
ttggcacgtcgacaagatcttgaacgggacgcgcaacgccagcgtcatgtctctttggat
cgagagcgtctgttgcggcgcgccgcacgtctacgcggtgggtgggcgcaaatgcgggtt
gcgggacgcaccatgtgggaaacggaagcgttccttgttcaggcgcgcgcggcattgcat
gccttgcgagccagcgaggccgacggcgtggttcctggaggcggtaaagcgttggaaaga
ctcgccgacatgatgcagtcggacagcgcgatgcgttccgtggcaacgccgccggacgag
atcgagtgggcggcgatacaggtcgtcgcagcggcatgccgtgccgtcagacgtcagatt
gtgctgaacgacggggcgtttggagaaaggacggtagtggatcccctgtgcaccacgacg
gatctgttgcggcgttcgctgtcgctgacgacagcgctgatcggcattgaagtattgatt
gcctga
DBGET
integrated database retrieval system
