Rhodococcus antarcticus: RHODO2019_02395
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Entry
RHODO2019_02395 CDS
T09186
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHODO2019_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rant03021
]
RHODO2019_02395
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_02395
Enzymes [BR:
rant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHODO2019_02395
Transcription machinery [BR:
rant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHODO2019_02395
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHODO2019_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UZJ25351
LinkDB
All DBs
Position
461552..462604
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPSLTEEPIEDTRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPSGVTVHN
PELHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKPSITPRDAVASSGKTLTELFGLARELNVEAEGIEIGPSLAE
ADHIAAFTMPIEDLDLTVRSYNCLKREGVHTVGELVGRSEADLLDIRNFGAKSIDEVKVK
LIGLGLTLKDSPPGFDPSTVAGYDAATGTWSDTTDAATTDDTDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcccagcgcccctcgctcaccgaggagcccatcgaggacacccgttcgcgg
ttcgtcatcgagccgctcgagcccggcttcggctacacgctcggcaactcgctgcgccgc
acgctgctcagctcgatcccgggtgcggccgtgaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtcccgggggtgaaggaggacgtcaccgacatcatcctgaacctc
aagggcctggtcgtgagctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggccccggggccgtcaccgccggtgacatcgtgccgccctcgggcgtcacggtgcacaac
ccggagctgcacatcgcaaccctgaacgacaagggcaagctcgaggtggagctcgtcgtc
gagcgcggtcgcggctacgtgccggccgtgcagaacaaggcctccggcgccgagatcggt
cgcatcccggtcgactccatctactcgcccgtgctcaaggtgacctacaaggtcgaggcc
acccgcgtcgagcagcggaccgacttcgaccggctggtgctggacgtggagaccaagccc
tccatcaccccgcgcgacgccgtcgcctcctcgggcaagaccctcaccgagctcttcggg
ctggcccgcgagctcaacgtggaggccgagggcatcgagatcggtccctcgctggccgag
gccgaccacatcgcggcgttcacaatgccgatcgaggacctcgacctcacggtgcgctcg
tacaactgcctcaagcgtgagggcgtgcacaccgtcggcgagctcgtcggccgcagcgag
gcggacctgctcgacatccgcaacttcggggccaagtccatcgacgaggtcaaggtcaag
ctcatcgggctcggcctcaccctcaaggactcccccccggggttcgacccgtccacggtc
gccggctacgacgccgccaccggaacgtggagcgacaccacggacgccgccaccaccgac
gacaccgactacgccgagaccgaacagctgtaa
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