Rhodococcus antarcticus: RHODO2019_02565
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Entry
RHODO2019_02565 CDS
T09186
Name
(GenBank) cobalamin B12-binding domain-containing protein
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rant03000
]
RHODO2019_02565
Transcription factors [BR:
rant03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RHODO2019_02565
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
B12-binding_2
B12-binding
HTH_Tnp_1
HTH_28
HTH_Tnp_ISL3
HTH_23
HTH_17
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UZJ25380
LinkDB
All DBs
Position
498466..499494
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AA seq
342 aa
AA seq
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MSAVPPAVDDDGAVLPPGEPTGLRLTVSAVARRMGVAPATLRTWDRRYGLGPGEHSSGTH
RRYAPEDVARLEVMQRALVEGATPAEAARLAVSGPRPAAAPTRGPATQLASVRRPTAPSV
EHEDTAPGVGAGAALRMPGAGRQARGLGRAALALDGDVTVRLLQTSVHDIGVIRTWDEVA
RPVLRAVADRWSRTGLGIEVEHMLSEAVTSVMARVAFQNHAPASVRPVLLGSMPGEHHSL
PLRVLAATLAERGVGASLLGADLPGTALAAAITRTAPSAVFLWSQAPESADAALVGGLPR
TRPRTRCYVGGPGWDTSVLPRAVVPLGSLGEAGNVLTAAAGL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgccgtgccccccgcggtggacgacgatggtgcggtgctgcccccgggggagccg
accggactgcggctgacggtctcggcggtggcccggcgcatgggggtcgcccccgcaacc
ctgcgcacctgggaccgccgctacggactgggaccgggcgagcactcctcgggcacccac
cggcgctacgcccccgaggacgtcgcgcggctcgaggtcatgcagcgggctctcgtggag
ggcgcgacgcccgccgaggccgctcggctggccgtgtccggtccgcgccccgcggcagct
ccgacccgcggcccggccacacagctcgcgtccgtccggaggccgacggcgccctcggtc
gagcacgaggacaccgcgcccggtgtcggagccggtgcggcgctgcggatgccgggcgcc
ggacgacaggcgcgcgggctcgggcgcgcggcgctcgccctggacggggacgtgacggtg
cggctcctgcagacctccgtccacgacatcggcgtcatccgcacctgggacgaggtggcc
cggccggtgctgcgggcggtggccgaccggtggtcccgcacggggctcggcatcgaggtg
gagcacatgctgtccgaggcggtcacctcggtgatggctcgggtggcctttcagaaccac
gccccggcgtccgtccgtccggtgctgctgggatcgatgcccggcgagcaccactccctg
ccgctccgggtgctcgccgccacgctcgccgaacggggtgtgggagccagcctgctgggg
gcggacctgcccggcacggcgctggccgcggcgatcacccgcaccgcaccgtctgcggtg
ttcctctggtcgcaggcgccggagagcgccgatgccgccctggtgggcggtctcccgcgg
acgcgaccgcgcacgcgctgctacgtcggtggacccggctgggacacgtcagtgctgccg
agggcggtggtgccgctggggtcgctcggcgaggccggcaacgtgctcacggcggccgcc
ggtctgtga
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