Rhodococcus antarcticus: RHODO2019_03460
Help
Entry
RHODO2019_03460 CDS
T09186
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00521
Streptomycin biosynthesis
rant00523
Polyketide sugar unit biosynthesis
rant00525
Acarbose and validamycin biosynthesis
rant00541
Biosynthesis of various nucleotide sugars
rant01100
Metabolic pathways
rant01110
Biosynthesis of secondary metabolites
rant01250
Biosynthesis of nucleotide sugars
Module
rant_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RHODO2019_03460 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RHODO2019_03460 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RHODO2019_03460 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RHODO2019_03460 (rfbB)
00525 Acarbose and validamycin biosynthesis
RHODO2019_03460 (rfbB)
Enzymes [BR:
rant01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RHODO2019_03460 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
UZJ25538
LinkDB
All DBs
Position
689892..690887
Genome browser
AA seq
331 aa
AA seq
DB search
MRLLVTGGAGFIGANFVHQTVTHRPDHQVTVLDSLTYAGNRASLEPVASSVELVEGSIAD
GPLVDRLVAEHDIVVNFAAESHNDNSLRDPEPFLQTNIIGTYRLLEAVRAHGKRLHHVST
DEVFGDLELDDPKRFTEDTPYRPSSPYSSTKAGADLLVRAWVRSFGIEATISNCSNNYGP
YQHVEKFIPRQVTNILSGVKPKVYGAGANVRDWIHVDDHNRALHAILDGGRLGETYLIGA
DGEADNLTVVRTLLRVLGKAEDWFDFVGDRPGHDLRYAIDAGKLRTELGWTPQYADLETG
LAATVAWYRDNEAWWAPAKAATEAGYSALGR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttgttggtcaccggcggtgccggattcatcggggcgaacttcgtccaccagacg
gtgacgcaccgtcccgaccaccaggtcacggtgctcgactcgttgacctacgccggcaac
cgcgcgagcctggagccggtcgcgtcctcggtcgagctcgtggagggctccatcgccgac
ggtccgctggtggaccgcctcgtcgccgagcacgacatcgtggtcaacttcgccgccgag
agccacaacgacaactcgctgcgcgaccccgagccgttcctgcagacgaacatcatcggt
acctaccgcctgctggaagccgttcgtgcgcacggcaagcggctgcaccacgtctccacc
gacgaggtgttcggcgacctcgagctcgacgaccccaagcggttcaccgaggacaccccc
taccgcccgtcgagcccgtactcctcgaccaaggccggggcggacctgctggtccgcgcc
tgggtgcgcagcttcggcatcgaggccaccatctccaactgcagcaacaactacgggccc
taccagcacgtcgagaagttcatcccgcgccaggtcacgaacatcctctccggcgtgaag
ccgaaggtctacggggccggggccaacgtgcgcgactggatccacgtcgacgaccacaac
cgggccctgcacgccatcctcgacggcggccgcctgggggagacctacctcatcggggct
gacggcgaggccgacaacctcacggtggtccgcaccctgctccgggtgctgggcaaggcc
gaggactggttcgacttcgtgggcgaccgcccgggccacgacctgcgctacgcgatcgac
gccggcaagctccgcaccgagctcggctggaccccgcagtacgccgacctcgagaccggg
ctggccgcgaccgtcgcctggtaccgcgacaacgaggcgtggtgggcacccgccaaggcc
gccaccgaggccggctactcggccctgggacgatga
DBGET
integrated database retrieval system