Rhodococcus antarcticus: RHODO2019_03615
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Entry
RHODO2019_03615 CDS
T09186
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_03615
Enzymes [BR:
rant01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHODO2019_03615
DNA repair and recombination proteins [BR:
rant03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHODO2019_03615
Prokaryotic type
RHODO2019_03615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UZJ25563
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All DBs
Position
complement(723682..724899)
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AA seq
405 aa
AA seq
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MTLLPAPPTDDAPAWVAEHLGHLTRDGVRASRRFRGGQSAADAALATLDLTGYASRRNEV
LPVGRRGATGLSPYIRHGLLPLPDVWAAAADAPTRDRDKFRDELLWQEYARHLYARAGTR
TRTALRAEPPRPQRTWEQPWPRAMACVDSALTELETDGWMVNQTRMWLSSQWTVRAGWDW
AAGEDEMFAQLLDGSRAANRLGWQWTTGAGSGKPYGFSRWQVRKRAPGLCEGCALNQACP
IQDWPADQDTRWLPREDLLAADPDVSATAGPREVVRTAEPEAVWLTAESLGTSDPALAAN
PDLPVVFVLDEPLLTSLRLAGARLVFLAQCLAELGADRELEVHLGRPAQVLAGRAVAVTT
APVPGFRRLARRVEPAELHPWPWLRRPGAGPVQSFSAWRRSVGRG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctgctgccagctccccccaccgacgacgccccggcctgggtggccgagcacctc
ggccacctcacccgggacggggtgcgggcgtcgcggcggttccggggtgggcagagcgcg
gccgacgccgccctcgccaccctcgacctgaccggctacgccagccgccgcaacgaggtg
ctcccggtcggtcgacgcggcgccaccgggctctccccctacatccgtcacggcctgctc
ccgctgcccgacgtctgggccgccgcggccgacgccccgacccgcgaccgggacaagttc
cgcgacgagctgctctggcaggagtacgcccggcacctctacgccagggcggggacccgg
acccgcaccgccctgcgggccgaacccccccggccgcagcgcacctgggagcagccgtgg
ccccgcgccatggcctgcgtggacagcgcgctcaccgagctcgagaccgacggctggatg
gtcaaccagacccggatgtggctcagctcgcagtggaccgtgcgggccggctgggactgg
gcggcgggcgaggacgagatgttcgcccagctgctcgacggctcgcgcgcggccaaccgg
ctcgggtggcagtggaccacgggggcgggctccggcaagccctacggcttcagccggtgg
caggtgcgcaagcgcgcgcccgggctgtgcgaggggtgcgcgctgaaccaggcgtgcccc
atccaggactggccggccgaccaggacacccggtggctgccgcgcgaggacctgctggcc
gccgaccccgacgtgtccgccaccgccggaccgcgggaggtggtccgcacggccgagccc
gaggccgtgtggctcaccgcggagtccctggggacctccgacccggcactggcggcgaac
ccggacctgccggtggtgttcgtgctggacgagccgctgctgacgtcgctgcggctggcc
ggagcacggctggtgttcctggcgcagtgcctggccgagctcggggccgaccgggagctg
gaggtgcacctgggtcggcccgctcaggtgctcgccgggcgcgcggtggcggtgacgacg
gcccccgtgcccgggttccgccgcctggcgcgacgggtggaacccgccgagctgcacccg
tggccgtggctgcgccgaccgggagcgggcccggtgcagagcttcagcgcgtggcggagg
tcggtcggccggggttga
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