KEGG   Rhodococcus antarcticus: RHODO2019_04255
Entry
RHODO2019_04255   CDS       T09186                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rant  Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:rant00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rant03032]
    RHODO2019_04255
   03036 Chromosome and associated proteins [BR:rant03036]
    RHODO2019_04255
   03400 DNA repair and recombination proteins [BR:rant03400]
    RHODO2019_04255
DNA replication proteins [BR:rant03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RHODO2019_04255
Chromosome and associated proteins [BR:rant03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RHODO2019_04255
DNA repair and recombination proteins [BR:rant03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RHODO2019_04255
SSDB
Motif
Pfam: Bac_DNA_binding
Other DBs
NCBI-ProteinID: UZJ25671
LinkDB
Position
859482..860063
AA seq 193 aa
MNKAQLIDLLAQRMDGDKRAASVAVEGVVDIVVRTVQAGENVTITGFGVFEKRSRAARVA
RNPRTGETVHVAPTSVPSFRPGTTFKAVVSGQAELPADAPAVKRTASAASRARTTAVSKA
PARRGPATSAPAAKAPARKATAKAATSSVPKTAAAKAAAKAAAASAPPKAPKVEKPAKGK
KVDDKKKKSKPKK
NT seq 582 nt   +upstreamnt  +downstreamnt
atgaacaaggctcagctgatcgacctgctcgcacagcggatggacggcgacaagcgggca
gcctccgtggccgtcgagggcgtcgtcgacatcgtggtgcgcaccgtgcaggccggcgag
aacgtgaccatcaccgggttcggcgtgttcgagaagcgcagccgggccgctcgggtggcg
cggaacccgcgcacgggcgagaccgtccacgtggcgcccacctcggtgccctccttcaga
cccggcaccaccttcaaggccgtggtgagcgggcaggccgagctccccgccgacgcgccg
gccgtcaagcgcaccgccagcgccgcgtcgagggcgcggacgacggccgtctcgaaggcg
ccggcgaggcggggccccgcgacgagcgcgccagcggcgaaggcccccgccaggaaggcg
acggcgaaggcggccaccagctcggtcccgaagacggccgcggcgaaggccgcggccaag
gcggcggccgcgtcagccccgcccaaggcacccaaggtggagaagcccgccaagggcaag
aaggtcgacgacaagaagaagaagtccaagcccaagaagtag

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