Rhodococcus antarcticus: RHODO2019_04825
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Entry
RHODO2019_04825 CDS
T09186
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00500
Starch and sucrose metabolism
rant01100
Metabolic pathways
rant01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RHODO2019_04825 (glgX)
Enzymes [BR:
rant01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RHODO2019_04825 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
DUF3459
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
UZJ25771
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All DBs
Position
complement(981488..983533)
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AA seq
681 aa
AA seq
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MNTPRVSNPHASNPRSLPHPLGATPRPDGTLDVAVYSETADAVDVAVFEADGSERTVRLD
EHTGHVFHGLVPDAGVGTRYGLRVHGPWDPSNGLRHNPANLLLDPYATAVEGEVDWSEDV
FSHLHDELGTRNDADSADRMPRCVVTDRTFDWGDDTPPRTRVRDTVVYEVHVKGFTQLHP
DVPEEIRGTYAGMAHPAAIAHLTDLGVTAVELLPVHQFAQDSHLLEQGLRNYWGYNSLSF
LAPHGDYSSVGDGGGQVAEFKAMVKALHAAGLEVILDVVYNHTAEGNHRGPTLSFKGIDN
AAYYRLVEGDEASYFDTTGTGNSLNVGHPAALQLIMDSLRYWVTEMHVDGFRFDLATTLT
RQAGDAEIHSAFLTLCHQDPVLRTVKLIAEPWDTAGYQVGGFPADWSEWNGKFRDDVRDF
WRGEPGTLGELAQRLTGSPDVYEGSRRSPLCSVNFITAHDGFTLHDLTAYESKHNEDNGE
DGNDGESDNRSWNGGVEGETDDEAVNARRDRQRRNFLATLLLSAGVPMILGGDEIGRTQG
GNNNAYCQDDEISWFDWAAVDHELLTFTRDLLTLRRENAALRAPDFRGSEGPDSVQMLRA
DGVGMNDDDWSDTNARSLAVRLAAQDSATFLLLLNASEGPVEFTVPEGAWTLALSSDPEQ
EVGADVQTLLVAGKSVTLLKC
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgaacactccccgcgtctcgaacccccacgcctcgaaccctcggagcctgccgcacccc
ctgggggccaccccccgacccgacggcaccctcgacgtggccgtgtactccgagaccgcc
gatgctgtcgacgtggccgtgttcgaggccgacggctccgagcgcacggtgcgcctggac
gagcacaccggacacgtcttccacggcctggtgcccgacgccggtgtcggcacccgctac
ggcctgcgcgtgcacggcccgtgggacccctcgaacggactgcgccacaacccggccaac
ctgctgctcgacccctacgccaccgccgtggagggcgaggtggactggagcgaggacgtc
ttcagccacctgcacgacgagctcggcacccgcaacgacgccgactccgccgaccgcatg
ccgcgctgcgtggtcaccgaccgcaccttcgactggggcgacgacaccccgccgcgcacc
cgggtccgcgacacagtcgtctacgaggtgcacgtcaagggcttcacccagctgcacccc
gacgtgcccgaggagatccgtggcacctacgccggcatggcccaccccgcggcgatcgcc
cacctcaccgatctcggggtcaccgccgtcgagctgctgcccgtgcaccagttcgcccag
gactcgcacctgctcgagcagggcctgcgcaactactgggggtacaactcgctgagcttc
ctcgccccgcacggcgactacagctcggtcggcgacggcggcggccaggtggcggagttc
aaggccatggtgaaggccctgcacgccgcggggctcgaggtcatcctggacgtggtctac
aaccacaccgccgagggcaaccaccggggcccgacgctgagcttcaaggggatcgacaac
gccgcctactaccggctggtggagggtgacgaggcctcctacttcgacaccacgggcacc
gggaacagcctcaacgtgggccaccccgcggccctccagctcatcatggactcgttgcgc
tactgggtcaccgagatgcacgtcgacggcttccgcttcgacctggccaccaccctgacc
cggcaggccggcgacgccgagatccacagcgcgttcctcaccctctgccaccaggacccg
gtgctgcgcacggtcaagctcatcgccgagccctgggacaccgccggctaccaggtcggt
gggttcccggccgactggtcggagtggaacggcaagttccgcgacgacgtgcgggacttc
tggcgcggcgagcccggcaccctgggcgagctggcccagcgcctcaccggcagcccggac
gtctacgagggcagccgtcgcagcccgctgtgcagcgtcaacttcatcaccgcccacgac
ggcttcaccctgcacgacctcaccgcctacgagtccaagcacaacgaggacaacggcgag
gacggcaacgacggggagagtgacaaccgctcctggaacggcggggtggagggcgagacc
gacgacgaggcggtcaacgcccgccgcgaccgccagcgccgcaacttcctggccacgctg
ctgctctcggccggggtgccgatgatcctgggcggcgacgagatcggtcgcacccagggc
ggcaacaacaacgcctactgccaggacgacgagatctcctggttcgactgggccgcggtc
gaccacgagctgctcaccttcacccgtgacctgctcaccctgcgccgggagaacgcggca
ctgcgggccccggacttccgcggcagcgagggcccggactcggtccagatgctgcgggcc
gacggcgtgggcatgaacgacgacgactggtcggacaccaacgcccggtcgctggccgtc
cgcctcgccgcgcaggacagcgcgacgttcctgctgctgctcaacgcctccgagggtccg
gtggagttcaccgtgcccgagggggcctggacgctagcgctgtcctcggaccctgagcag
gaggtgggcgccgacgtgcagaccctgctcgtcgccgggaagtcggtgaccctgctgaag
tgctga
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