Rhodococcus antarcticus: RHODO2019_05035
Help
Entry
RHODO2019_05035 CDS
T09186
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rant03016
]
RHODO2019_05035 (truB)
Enzymes [BR:
rant01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RHODO2019_05035 (truB)
Transfer RNA biogenesis [BR:
rant03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RHODO2019_05035 (truB)
Prokaryotic type
RHODO2019_05035 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UZJ25808
LinkDB
All DBs
Position
1025108..1026088
Genome browser
AA seq
326 aa
AA seq
DB search
MPPHRRPPTGLDGAGLLVVDKPAGMTSHDVVARCRKLLGTRKIGHAGTLDPMATGVLVLG
VERATKMLGLLSLTTKAYTATVRLGQSFDTDDAEGELLEAPGATAVDPAALAAAVAALTG
DIQQVPASVSALKVDGQRAHVRVRAGEQLDLPARPVTVSRFDVVAQRVVEVDGLAVLDLD
VEVDCTSGTYVRALARDLGAALGTGGHLTVLRRTRVGPFTLDHASTLEQLADDPRVSLDA
DEAALTAFGRREIDLEEAVVVSHGRWLEPRGVVGVHAAVGPDGRVVALLEESGGRARTVM
VVRPSTLGPAPDLPPGPVQVPDTGQP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgcccccccaccgccgcccccccaccggtctcgacggcgccggactgctggtggtggac
aagcccgccggcatgaccagccacgacgtggtggcccgctgccgcaagctgctgggcacc
cgcaagatcggccacgccggcactctcgacccgatggccaccggcgtgctggtgctcggg
gtcgagcgggccaccaagatgctcggcctgctcagcctcaccaccaaggcttacaccgcc
acggtgcgcctggggcagtccttcgacaccgacgacgcggagggcgagctgctcgaggcg
ccgggggccaccgccgtggaccccgccgccctcgccgcggccgtggcggccctgaccggg
gacatccagcaggtgcccgccagcgtcagcgcgctcaaggtcgacggccagcgcgcccac
gtccgggtccgcgccggcgagcagctggacctgccggcccgcccggtgacggtgagccgc
ttcgacgtcgtggcgcagcgggtggtcgaggtggacgggctcgcggtgctcgacctcgac
gtcgaggtggactgcacctccggcacctacgtccgtgccctggcccgtgacctcggggcc
gcgctgggcaccggtgggcacctcaccgtgctgcggcgcacccgggtgggcccgttcacc
ctggaccacgccagcaccctggagcagctggccgacgacccgcgggtcagcctggacgcc
gacgaggccgccctcaccgcgttcgggcgccgcgagatcgacctcgaggaggccgtggtg
gtcagccacggccgctggctggagccgcggggcgtggtcggggtgcacgccgcggtgggt
ccggacgggcgcgtggtcgcgctgctggaggagtcgggcggccgcgcgcgcaccgtcatg
gtcgtgcggccctcgacgctgggccccgctcccgacctcccgccgggtccggttcaggtc
cccgacaccgggcagccgtag
DBGET
integrated database retrieval system
