Rhodococcus antarcticus: RHODO2019_05175
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Entry
RHODO2019_05175 CDS
T09186
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rant03009
]
RHODO2019_05175 (rimO)
Enzymes [BR:
rant01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RHODO2019_05175 (rimO)
Ribosome biogenesis [BR:
rant03009
]
Prokaryotic type
ribosomal protein modification factors
RHODO2019_05175 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UZJ25833
UniProt:
A0ABY6P2U4
LinkDB
All DBs
Position
1050231..1051664
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AA seq
477 aa
AA seq
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MSLLTMGCARNEVDSEELAGRLAEGGFELVGDGEDTDLVVVNTCGFVEQAKKDSIDTLLA
ASDTGAKVVAVGCLAERYGEQLAADLPEADAVLGFDHYPDMAARLKEILGGHAVPSHTPS
DRRLLLPISPVDRPAAASDVTVPGHAWGPASRVVRRRLDDAPVAPLKLASGCDRRCSFCA
IPSFRGSFVSRSPADVLSEARWLAEQGVRELYLVSENSTSYGKDLGDPTVLDTLLPALAE
VPGIDRVRLSYLQPAETRPALLAAIAGTAGVADYFDLSFQHASGAVLRRMRRFGDRESFL
GLCEQIRALSPEAGIRTNVIVGFPGETEDDLVELEQFLIGARLDAVGVFGYSDEDGTEAV
GLDGHLDAAEVVARVQRISSLVDELTSQRAEDRIGTEVVVLVEDSGDGEMGDGALAEGEV
GLATGRAAHQAPEVDGECVFTEVGEVTVGEMWRCRVVASEGVDLVVEALEPLARVAG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgctcaccatgggctgcgcccgcaacgaggtggactccgaggagctcgccggc
cgcctggcggagggcggtttcgagctcgtgggcgacggcgaggacaccgacctggtggtc
gtgaacacctgcgggttcgtcgagcaggccaagaaggactcgatcgacaccctgctcgct
gcctccgacaccggcgccaaggtcgtggccgttggctgcctggccgagcgctacggcgag
cagctcgccgccgacctgcccgaggccgacgcggtgctcggcttcgaccactaccccgac
atggccgcccgtctgaaggagatcctcggcggtcacgccgtgcccagccacaccccgtcg
gaccgtcggctgctgctgcccatctccccggtggaccgcccggcggccgcgtcggacgtc
accgtccccggccacgcgtggggtccggcgagccgggtggtgcgacgccgcctggacgac
gccccggtcgccccgctcaagctggcgtcgggctgcgaccggcgctgctcgttctgcgcc
atcccctccttccgcggctcgttcgtctcgcgcagtcccgccgacgtcctgagcgaggct
cgctggctggccgagcagggcgtgcgggagctgtacctggtcagcgagaactccacctcc
tacggcaaggacctcggcgacccgaccgtcctggacaccctcctgcccgcgctggccgag
gtaccgggcatcgaccgggtgcgactgagctacctgcagcccgccgagacgcgaccggcc
ctgctggccgccatcgccggcaccgcgggtgtcgccgactacttcgacctctcgttccag
cacgcctccggtgcggtgctgcgccggatgcggcgcttcggcgaccgggagagcttcctg
ggcctgtgcgagcagatccgcgcgctgagccccgaggcgggcatccgcaccaacgtcatc
gtgggcttccccggcgagaccgaggacgatctcgtcgagctcgagcagttcctgatcggg
gcccgcctggacgccgtgggggtgttcggctactccgacgaggacggcaccgaggccgtg
ggcctggacggtcacctcgacgcggccgaggtcgtcgcgcgcgtgcagcggatctcgtcg
ctggtcgacgagctcaccagccagcgcgcggaggaccggatcggcaccgaggtcgtcgtg
ctcgtggaggacagcggtgacggcgagatgggcgacggggccctggccgagggcgaggtg
ggcctggccacgggtcgcgcggcgcaccaggcgcccgaggtcgacggggagtgcgtgttc
accgaggtcggcgaggtgaccgtcggcgagatgtggcgctgccgggtggtggcctcggag
ggcgtggacctggtcgtggaggccctcgagccgctggcccgggtcgcggggtga
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