Rhodococcus antarcticus: RHODO2019_05280
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Entry
RHODO2019_05280 CDS
T09186
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rant03016
]
RHODO2019_05280 (miaB)
Enzymes [BR:
rant01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RHODO2019_05280 (miaB)
Transfer RNA biogenesis [BR:
rant03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RHODO2019_05280 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UZJ26531
LinkDB
All DBs
Position
1071967..1073400
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AA seq
477 aa
AA seq
DB search
MNVHDSERLAGLLEDAGYARAEPDAQADVVVFNTCAVRENADNKLYGNLSHLAPARRANP
DMRIAVGGCLAQKDRETIVAKAPWVDVVFGTHNIGSLPALLERSRHNDEAQVEILEALDV
FPSSLPARRESSYSGWVSISVGCNNSCTFCIVPALRGVEVDRRPADVLAEVRALVAEGVL
EVTLLGQNVNAYGTGPGGVGQGAFADLLRACGEVEGLERVRFTSPHPRDFTDDVIAAMAQ
TPNVMPQLHMPLQSGSDRVLRSMRRSYRSERYLGILDRVREAMPHAAITTDVIVGFPGET
EEDFQATLDVVRASRFTNAFTFQYSPRPGTPAAGMGDQVPKEVVGERYVRLTTLQDEMAL
AGNRELVGTEVELLVAAGEGRKDVHTARMSGRARDGRLVHFVPGERAVRPGDVVTTVVTH
AAPHHLVADAVLVGHRRTRAGDLHEAGARPRTAGVGLGLPTVGAPSTPVAAAGGCGA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcacgactccgagcgcctggcgggcctgctggaggacgccgggtacgcacga
gcagaaccggacgcgcaggccgacgtcgtcgtgttcaacacctgtgcggtccgcgagaac
gccgacaacaagctgtacggcaacctcagccacctggccccggcgaggcgggcgaacccg
gacatgcgcatcgccgtcggggggtgcctggcccagaaggaccgcgagacgatcgtggcc
aaggccccgtgggtggacgtcgtgttcggcacccacaacatcggttcgctgccggcgctg
ctcgagcgctcgcgacacaacgacgaggcgcaggtggagatcctcgaggcgctcgacgtg
ttcccctccagcctgcccgcgcgccgggagtcgagctactcggggtgggtctccatctcg
gtgggctgcaacaacagctgcacgttctgcatcgtgcccgcgctgcgcggggtcgaggtg
gaccgccgtccggccgacgtgctcgccgaggtgcgggcgctcgtcgccgagggcgtgctg
gaggtgaccctgctgggtcagaacgtcaacgcctacggcaccggtccggggggcgtgggc
cagggtgcgttcgccgacctgctccgtgcgtgtggcgaggtcgaggggctggagcgggtg
cgcttcacgtcgccgcacccgagggacttcaccgacgacgtgatcgcggcgatggcgcag
accccgaacgtcatgccgcagctgcacatgccgctgcagtccggctccgaccgggtgctg
cggtcgatgcgccggtcctaccgcagcgagcgctacctcggcatcctcgaccgggtgcgc
gaggcgatgccgcacgcggcgatcaccaccgacgtcatcgttggattccccggcgagacc
gaggaggacttccaggccaccctggacgtcgtgcgggcgtcgcggttcaccaacgcgttc
accttccagtactcgccgcgaccgggcaccccggccgcggggatgggtgaccaggtgccc
aaggaggtcgtgggggagcggtacgtgcggctgaccacgctgcaggacgagatggcgctg
gcgggcaaccgtgagctcgtggggaccgaggtcgagctgctggtggccgccggcgagggc
cgcaaggacgtgcacacggcgcggatgagcggccgggcgcgtgacgggcggctggtgcac
ttcgtgcccggcgagcgcgcggtgcgcccgggtgacgtggtcaccaccgtggtgacgcac
gccgcaccccaccacctcgtcgcggacgccgtgctggtcgggcaccgccgcacgcgggcc
ggtgacctgcacgaggccggtgcccgcccccgcaccgccggggtggggctggggctgccg
acggtgggggcgccgagcacgcccgtggcggccgcgggaggatgtggggcatga
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