Rhodococcus antarcticus: RHODO2019_05645
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Entry
RHODO2019_05645 CDS
T09186
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rant03016
]
RHODO2019_05645
Enzymes [BR:
rant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RHODO2019_05645
Transfer RNA biogenesis [BR:
rant03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHODO2019_05645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UZJ25917
LinkDB
All DBs
Position
complement(1149582..1150871)
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AA seq
429 aa
AA seq
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MPDDDTPAPASADDAPSTTPLLVPADGVPPVTTTAAALAEASGRLAAGTGPVALDAERAS
GFTYSARAYLVQLRRAGAGSFLVDPIPTAGAMGPLAAALDGPEWVLHAASQDLPCLAELG
LHPASVFDTELAGRLLGHERVGLAAMVENVLGLGLQKGHGAADWSSRPLPADWLVYAALD
VEVLLELREALVVELAEQGKAEWARQEFEHVRLAGPPAPKPDRWRRTSGIHTLRRPRQLA
AVRELWQTRDALAASRDIAPGRVLPDSAIADAARADPTDVGGLTTLKVFGGRMQRKQART
WLGALERARTLPEDQLPPTAAPHEGPPPVSRWADRDPAAHARLTAARTLLVELGESHRVP
VENLLLPDLLRRTCWTPPEQVDADGVDAALAAGGARPWQRELLLPGLVPALRASAPEAPR
AEPAPAATE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgacgacgacacccccgcccccgcctcggccgacgacgcgccgtccacgaccccg
ctgctcgtccccgccgacggcgtcccaccggtcaccaccaccgccgccgccctggccgag
gcctccgggcgcctggccgccggcaccggacccgtcgcgctggacgccgagcgcgccagc
ggcttcacctactccgcacgggcgtacctggtgcagctgcggcgggcgggcgccggctcg
ttcctcgtcgaccccatccccaccgccggcgcgatgggcccgctggcggccgccctggac
ggtcccgagtgggtgctgcacgccgccagccaggacctgccgtgcctggccgagctgggt
ctgcaccccgcgtcggtgttcgacaccgagctcgccggacggctgctcggccacgagcgg
gtcggtctggccgcgatggtggagaacgtgctcggcctggggctgcagaagggccacggc
gccgctgactggtcgagccggccgctgcccgcggactggctggtctacgccgcgctggac
gtggaggtgctgctggagctgcgcgaggccctggtggtcgagctggcggagcagggcaag
gcggagtgggcccgtcaggagttcgagcacgtgcgcctcgccggcccaccggccccgaag
ccggaccgctggcggcgcacctccgggatccacaccctgcgcaggccgcgccagctcgcg
gccgtgcgggagctctggcagacccgcgacgccctggccgcgagccgcgacatcgctccc
ggccgggtgctgccggactccgcgatcgccgacgcggcccgggccgaccccaccgacgtc
ggcgggctcaccaccctgaaggtgttcggcggtcgcatgcagcgcaagcaggcccgcacc
tggctcggggccctggagcgggcccgcaccctgccggaggaccagctgcccccgaccgcc
gctccgcacgagggccccccgccggtcagccgctgggccgaccgcgacccggccgcccac
gcgcggctgaccgccgcccgcaccctgctcgtcgagctcggcgagagccaccgggtgccg
gtggagaacctgctgctgccggacctgctgcgccgcacgtgctggaccccgcccgagcag
gtggacgcggacggggtggacgcggcgctggccgccggaggtgcccgcccgtggcagcgc
gagctgctgctgcccggcctggtcccggccctgcgcgcgagcgcgccggaggcaccgcgc
gcggaaccggctcctgccgccacggagtga
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