Rhodococcus antarcticus: RHODO2019_06630
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Entry
RHODO2019_06630 CDS
T09186
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00750
Vitamin B6 metabolism
rant01100
Metabolic pathways
rant01240
Biosynthesis of cofactors
Module
rant_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
RHODO2019_06630 (pdxS)
Enzymes [BR:
rant01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
RHODO2019_06630 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
Glu_synthase
NMO
TetR_C_27
FMN_dh
OMPdecase
DHO_dh
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
UZJ26545
UniProt:
A0ABY6P4E1
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All DBs
Position
1382954..1383802
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AA seq
282 aa
AA seq
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MAEMLKGGVIMDVVNVEQARIAEDAGAVAVMALERVPADIRAEGGVSRMSDPDMIDAIQA
AVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEVLTPADYAHHIDKWRFTVPFVCGATNL
GEALRRINEGAAMIRSKGEAGTGDVSNATMHMRTISAEIRRLTSLSPDELYVAAKDLQAP
YDLVVEVATAGRLPVTLFTAGGIATPADAAMMMQLGADGVFVGSGIFKSGNPAQRAEAVV
KATTFFDDADMVAKVSRGLGEAMVGINVEQLPVDHRLSSRGW
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgctcaagggcggcgtgatcatggacgtcgtcaacgtcgagcaggcccgg
atcgccgaggacgccggcgccgtcgccgtgatggccctggagcgcgtgcccgccgacatc
cgcgccgagggcggcgtgtcccggatgagcgacccggacatgatcgacgccatccaggcg
gccgtgagcatccccgtgatggccaaggcccgcatcggtcacttcgtcgaggcccaggtg
ctgcagagcctcggcgtggactacatcgacgagtccgaggtgctcacccccgccgactac
gcccaccacatcgacaagtggcgcttcaccgtgccgttcgtctgcggcgcgaccaacctc
ggcgaggcgctgcgccgcatcaacgagggtgcggcgatgatccggtccaagggtgaggcc
ggcaccggcgacgtgtccaacgccacgatgcacatgcgcaccatctccgcggagatccgt
cggctgacctcgctcagccccgacgagctctacgtcgcggccaaggacctccaggccccg
tacgacctcgtcgtcgaggtggccacggccggccgcctgcccgtcaccctgttcaccgcc
ggcggcatcgccaccccggcggacgccgcgatgatgatgcagctcggcgccgacggcgtg
ttcgtgggctcgggcatcttcaagtccggcaacccggcgcagcgtgccgaggccgtcgtc
aaggccaccaccttcttcgacgacgccgacatggtcgccaaggtctcccgcgggctcggc
gaggccatggtcggcatcaacgtcgagcagctgccggtcgaccaccggctctccagccgc
ggctggtga
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