Rhodococcus antarcticus: RHODO2019_07380
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Entry
RHODO2019_07380 CDS
T09186
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHODO2019_07380 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_07380 (recD)
Enzymes [BR:
rant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RHODO2019_07380 (recD)
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHODO2019_07380 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
RecD_N
Viral_helicase1
Helicase_RecD
UvrD-helicase
AAA_22
SH3_13
PhoH
AAA_16
AAA_28
TraI_hel_assoc_N
nSTAND3
Glycos_transf_N
SLFN-g3_helicase
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UZJ26221
LinkDB
All DBs
Position
1547474..1549294
Genome browser
AA seq
606 aa
AA seq
DB search
MIPVRATGLLRDFAEAGVLEAADVHVALRLSQLGGEGAETVLLAAALAVRGVRTGSVCVD
LATIAGSVLVDPDPDHPDPDDPDRDDPGAEPTPDPTGAVAPPLAWPETWDALQDSPLVAV
GVDAPWRPLRLVHGLLYLDRYWQQEQLVRRELDQRAARPTPALDLSALPGLFPVPGPDRQ
RLAVAVAADRWVSVITGGPGTGKTHTVARLLALLLAQPGPTPRIALTAPTGKAAARLQES
VQSQAAAVGLPLDLTASTLHRLLGWRPDSQSRFRHHAGNRLPYDVVVVDESSMVSLTLMA
RLLDAVRPTARLVLVGDPDQLTPVDAGAVLSDLVHRPAPTGAPVTAPSGIDPTELDLDGT
ERAQLGNGIVRLRVSHRYGHQIGALAEAIRTGDADATLGLLHDGGSLTLEPGFDALRTEV
TATGVDMAAAASAGDAARAITLLGTHRLLCAHRTGPHGVTWWNEECSRWSGATGARWYAG
QPLLITANDYENALHNGDTGVVVETPDGLQAAFARAGGIERIALSRLSSVVTAHALTVHR
SQGSQYESVTLVLPPPTSPLLTRELFYTAITRASAHVRVIGSEESVRAAVGRQLVRASGL
RRTSTG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgatccccgtccgggccaccggcctgctccgggacttcgccgaggccggcgtcctggag
gccgcggacgtccacgtcgccctccggctgtcccagctcggcggcgagggggcggagacg
gtcctgctcgccgccgccctcgccgtgcggggggtccggaccggctccgtctgcgtcgac
ctcgccaccatcgcgggctccgtgctcgtcgaccccgatcccgaccaccctgatcctgac
gaccccgatcgtgacgacccgggggcagagcccacgccggaccccaccggcgccgtcgcg
ccccccctggcctggcccgagacctgggacgccctgcaggacagccccctcgtggccgtc
ggggtcgacgccccgtggcgcccgctgcggctggtccacggcctgctgtacctcgacagg
tactggcagcaggagcagctggtgcgccgcgagctcgaccagcgcgccgcccggcccacc
cccgccctcgacctcagcgccctgcccggcctgttccccgtgcccggtcccgaccgccag
cgcctcgccgtcgcggtcgccgccgaccgctgggtcagcgtcatcaccggcggccccggc
accggcaagacccacaccgtggcccggctgctggccctgctgctcgcccagcccggaccg
accccccgcatcgcgctgaccgcacccaccggcaaggccgccgcccggctgcaggagtcc
gtgcagtcccaggccgccgcggtcggcctcccgctcgacctcaccgcctccaccctgcac
cgcctcctgggctggcgccccgacagccagagccgcttccgccaccacgccggcaaccgt
cttccctacgacgtcgtcgtcgtggacgagtcctcgatggtgtcgctgacgctcatggcc
cggctgctcgacgccgtccgccccaccgcacgcctggtcctcgtcggcgaccccgaccag
ctcacccccgtcgacgccggcgcggtgctgagcgacctcgtgcaccgccccgcccccacc
ggcgcacccgtgacggcccccagcgggatcgacccgaccgagctcgacctcgacggcacc
gagcgtgcccagctgggcaacgggatcgtccggctgcgggtctcccaccgctacggccac
cagatcggggcgctggccgaggccatccgcaccggggacgccgacgccaccctgggcctg
ctgcacgacggcggctcgctgaccctggagcccgggttcgacgcgctgcgcaccgaggtg
accgcgaccggtgtcgacatggccgcggccgcgtcggccggggacgcggctcgcgccatc
accctgctcggcacccaccgcctgctctgcgcgcaccggaccggtccccacggggtgacg
tggtggaacgaggagtgcagccggtggagcggtgcgaccggggcacgctggtacgcgggc
caacccctgctgatcacggccaacgactacgagaacgccctccacaacggggacaccggc
gtcgtcgtcgagacccccgacggactgcaggccgccttcgcccgggccggcgggatcgag
cgcatcgctctgtcgcggctgtcgtcggtcgtcaccgcccacgccctgaccgtgcaccgc
tcccagggcagccagtacgagtcggtcaccctcgtcctgccaccccccacgtcgccgctg
ctgacccgcgagctgttctacaccgcgatcacccgggcctcggcgcacgtccgggtcatc
gggtccgaggagtcggtgcgcgccgccgtcggccgtcagctcgtccgggccagcgggctg
cgccggaccagcacgggctga
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