Rhodococcus antarcticus: RHODO2019_08455
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Entry
RHODO2019_08455 CDS
T09186
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rant
Rhodococcus antarcticus
Pathway
rant03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RHODO2019_08455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_08455
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RHODO2019_08455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
UZJ26411
LinkDB
All DBs
Position
complement(1760921..1761901)
Genome browser
AA seq
326 aa
AA seq
DB search
MPMRSMWKGAVSFGLVSIPVNLYVATESRSVTFHQVHAEDGGRVQTKRVCSVDGAEVPYH
DIAKGHETADGTVVVLTDEDFATLQVPSTKAVDVLEFVPLEAVDPIYFDKTYFLEPQKGG
IKPYLLLRDALHKSGHVAVAKIALRQRESLALLRVHADCLVLSTMLWPDEVRAPDFAFLR
EDAPPVRDAELAMAGSLIDSMSDEVFDPRQYQDTYRLQLEALIDRKVAGKEAVTPPTADD
TGGTVIDLMSALTASIEASRRTREGSGAEPTTAPAAKKAPVAKAAATKAAAKKTPAAKKT
PATKAASTKAPATKAAASKKAAATQA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgcggtccatgtggaagggcgcggtctccttcggcctggtctcgatcccggtg
aacctctacgtggcgaccgagagccggagcgtcaccttccaccaggtgcacgccgaggac
ggtggccgggtgcagacgaagcgggtctgctccgtggacggcgccgaggtgccctaccac
gacatcgcgaagggacacgagaccgccgacgggacggtggtggtgctgaccgacgaggac
ttcgccaccctgcaggtgcccagcaccaaggccgtggacgtgctggagttcgtgccgctg
gaggccgtggaccccatctacttcgacaagacctacttcctggagccgcagaagggcggg
atcaagccctacctgctgctgcgcgacgccctgcacaagtccgggcacgtggccgtggcc
aagatcgcgctgcggcagcgggagtcgcttgccctgctgcgcgtgcacgcagactgcctg
gtcctctcgaccatgctgtggcccgacgaggtgcgggcgccggacttcgcgttcctgcgg
gaggacgcacccccggtgcgcgacgccgagctggccatggcgggctcgctcatcgactcg
atgtccgacgaggtgttcgacccgcgccagtaccaggacacctaccggctccagctggaa
gccttgatcgaccgcaaggtggccggcaaggaggccgtgacgccaccgaccgcggacgac
accggcggcaccgtcatcgacctgatgtccgcgctcaccgcgagcatcgaggccagccgg
cgcacccgtgagggcagcggcgcggagcccaccacggccccggccgcgaagaaggccccg
gtagcgaaggccgccgccacgaaggctgctgcgaagaagaccccggctgcgaagaagacc
ccggccacgaaggccgcgagcacgaaagccccggccacgaaggctgcggcgtcgaagaag
gctgcggcgacgcaggcctga
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