Rhodococcus antarcticus: RHODO2019_09450
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Entry
RHODO2019_09450 CDS
T09186
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03030
DNA replication
rant03410
Base excision repair
rant03420
Nucleotide excision repair
rant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHODO2019_09450 (polA)
03410 Base excision repair
RHODO2019_09450 (polA)
03420 Nucleotide excision repair
RHODO2019_09450 (polA)
03440 Homologous recombination
RHODO2019_09450 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rant03032
]
RHODO2019_09450 (polA)
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_09450 (polA)
Enzymes [BR:
rant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHODO2019_09450 (polA)
DNA replication proteins [BR:
rant03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RHODO2019_09450 (polA)
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RHODO2019_09450 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHODO2019_09450 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UZJ23461
LinkDB
All DBs
Position
complement(1966510..1969203)
Genome browser
AA seq
897 aa
AA seq
DB search
MADPGAKTLLLLDGHSLAYRAFFALPAENFRTTSGQTTNAVYGFTSMLINLLRDEAPTHV
AAAFDVSRQTFRAEAYPEYKAGRSATPDEFRGQVDITKDVLAAMGIPVMAIPGFEADDII
ATLTTRATAEGFRVLVCTGDRDALQLVTEHVTVLYPRKGVSELTRFTPEEVQSKYGLSPA
QYPDFAALRGDPSDNLPGIPGVGEKTAAKWINEYGSLDGLVERVDQVKGKTGDALRENLS
SVLRNRQLTELVRDVELPYAPEQLALAAWDRERIHGLFDDLEFRVLRDRLFATLSSAEPE
AEEGFDVRGTVLEPGQVRAWLSAHARDGLRVGLSVTGPGTPTGGDATGVALAAGDGEGAF
VATAELDPDDDAALGEWLADAAVPKAAHELKRALHALGGRGWLLNGTTSDTALAAYLVRP
GQRSFDLADLALRHLHRELRADDGADDGQLSLLDDADADTARAATTEIVRARAVVDVAAA
LDLELEQIEETALLTEMELPLLEVLAELEHAGIAVDSAHLTDLQSDFAAQVADAAAKAFE
VIGKEINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDAAALENLFEATGHPFLEHLLAHR
DATRLKVTVDGLLKSVAEDGRIHTTFNQTIAATGRLSSTEPNLQNIPVRNDAGRRIRQSF
VVGEGYESLMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHTFVGARAFGVPLEEVTPE
LRRRVKAMSYGLAYGLSAFGLAAQLNISTEEAREQMEAYFSRFGGVRDYLRAVVEQARKD
GYTSTIFGRRRYLPDLNSDNRQRREVAERAALNAPIQGSAADIIKVAMLGVQKALAEQGL
RSRTLLQVHDELVLEVAVGEHEAVEALVRREMGAAYDLGVPMDVSVGTGRSWDAAAH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatcccggtgcgaagaccctgctcctgctggacggccactcgctggcctaccgg
gcgttcttcgcgctgccggcggagaacttccggaccaccagcgggcagaccaccaacgcc
gtctacggcttcacctccatgctcatcaacctgttgcgcgacgaggcacccacgcacgtc
gcggccgccttcgacgtctcgcggcagaccttccgcgcggaggcctacccggagtacaag
gccggccgcagcgccaccccggacgagttccgcggccaggtcgacatcaccaaggacgtc
ctcgcggccatgggcatccccgtcatggccatccctggcttcgaggccgacgacatcatc
gcgacgctgaccacccgggccacagcggaggggttccgggtgctcgtgtgcaccggggac
cgggacgcgctgcagctcgtcaccgagcacgtgacggtgctctacccccgtaagggcgtc
tccgagctgacccggttcacgccggaggaggtgcagtccaagtacggtctcagcccggcc
cagtacccggacttcgcggcgctgcggggggaccccagcgacaacctgccgggcatcccc
ggggtgggggagaagaccgcggcgaagtggatcaacgagtacggctcgctggacggtctc
gtcgagcgggtcgaccaggtgaagggcaagaccggcgacgcgctgcgggagaacctctcc
tcggtgctgcgcaaccgccagctcaccgagctcgtgcgcgacgtggagctgccctacgcc
cccgagcagctggcgctggccgcgtgggaccgcgagcgcatccacggcctgttcgacgac
ctggagttccgggtgctgcgcgaccgcctcttcgcgaccctgagctctgcggagccggag
gccgaggagggcttcgacgtgcggggcaccgtgctcgagcccggtcaggtgcgcgcgtgg
ctgtccgcccacgcccgcgacgggctgcgggtggggttgtcggtcaccggtccgggcacg
cccaccgggggtgacgccaccggcgtggccctggcggccggggacggcgagggtgcgttc
gtcgcgacggccgagctggaccccgacgacgacgcggcgctgggggagtggctggcggat
gcggccgtcccgaaggcggctcacgagctcaagcgcgccctgcacgccctcggcgggcgg
gggtggctgctcaacggcaccaccagcgacaccgccctggccgcctacctcgtgcggccc
ggccagcgcagcttcgacctggccgacctggcgctgcggcacctgcaccgggagctgcgt
gccgacgacggggccgacgacgggcagctctcgctgctggacgacgcggacgccgacacc
gcccgcgccgcgaccaccgagatcgtccgggcccgcgcggtggtggacgtcgccgccgcg
ctggacctggagctcgagcagatcgaggagaccgcgctgctcacggagatggagctcccg
ctgctggaggtgctcgccgagctcgagcacgccgggatagcggtcgactcggcccacctc
accgatctgcagtccgacttcgcggcccaggtggccgacgcggcggccaaggcgttcgag
gtgatcggcaaggagatcaacctcggttcgcccaagcagctgcaggtggtgctgttcgac
gagctggagatgccgaagaccaagcgcaccaagaccggctacaccaccgacgcggcagcg
ctggagaacctgttcgaggccaccgggcacccgttcctggagcacctgctggcccaccgc
gacgccacccgcctgaaggtcaccgtggacgggctgctgaagtccgtcgccgaggacggc
cgcatccacaccacgttcaaccagaccatcgcggccaccggacggctgagctccaccgag
cccaacctgcagaacatcccggtgcgcaacgacgcgggtcgccgcatcaggcagagcttc
gtggtgggcgagggctacgagagcctgatgacggccgactacagccagatcgagatgcgg
atcatggcccacctctccggcgacgagggtctcatcgaggccttcaacaccggcgaggac
ctgcacaccttcgtcggcgcccgcgcgttcggggtcccgctggaggaggtgaccccggag
ctgcgccggcgggtcaaggcgatgagctacggcctggcctacggcctgagcgcgttcggc
ctcgccgcgcagctgaacatctccaccgaggaggcccgcgagcagatggaggcctacttc
agccgcttcggcggggtgcgcgactacctgcgcgccgtggtggagcaggcccgcaaggac
gggtacacctcgacgatcttcggccgacggcgctacctcccggacctgaactccgacaac
cgccagcgtcgcgaggtggcggagcgggccgccctcaacgcccccatccagggctcggcc
gccgacatcatcaaggtggccatgctcggcgtgcagaaggcgctcgcggagcagggcctg
cgctcgcgcacgctgctgcaggtgcacgacgagctcgtgctcgaggtggccgtcggcgag
cacgaggccgtcgaggccctcgtccgccgggagatgggcgcggcctacgacctcggtgtg
ccgatggacgtctccgtcggcaccggccgttcgtgggacgccgccgcccactga
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