Rhodococcus antarcticus: RHODO2019_09700
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Entry
RHODO2019_09700 CDS
T09186
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03030
DNA replication
rant03430
Mismatch repair
rant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHODO2019_09700 (dnaE)
03430 Mismatch repair
RHODO2019_09700 (dnaE)
03440 Homologous recombination
RHODO2019_09700 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rant03032
]
RHODO2019_09700 (dnaE)
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_09700 (dnaE)
Enzymes [BR:
rant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHODO2019_09700 (dnaE)
DNA replication proteins [BR:
rant03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHODO2019_09700 (dnaE)
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHODO2019_09700 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UZJ26608
LinkDB
All DBs
Position
complement(2023156..2026689)
Genome browser
AA seq
1177 aa
AA seq
DB search
MAGSFVHLHTHTEYSMLDGAAKIGPLFDEAQRLGMPAVGMTDHGNMYGASEFYTQATAHG
ITPVIGIEAYVAPESRLSTKRVLWGDASQKSDDVSGSGAYTHLTMVAENATGLRNLFALS
SRASIEGQLGKWPRMDAEIIAEHAAGIIATTGCPSGEVQTRLRLGQEKQALEAAARWQDI
FGKENFFLELMDHGLSIERRVREGLLEVGRALGIPALATNDCHYVTKDAASNHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAEEMRELFADVEGACDNTLAIAERVQPYDEVWSKRDRM
PVFPVPDGSTQDEFLRDEVLAGLDRRFPDGVPDGYRPRAEFELGVIRDKGFPAYFLIVAD
LITHAREVGIRVGPGRGSAAGSLVAYSLGITNIDPIPHGLLFERFLNPERPSDPDIDIDF
DDRRRGEMVRYATERWGVDKVAQVITFGTIKTKAAIKDSARVTFGQPGFSMADRISKALP
PPVMAKDISLQGITDPTHERYKEAAEVRALIETDPDVAKIYQTARGLEGLIRNAGVHACA
VIMSSEPLMDAIPMWRRPQDGALITGWAYPDCESIGLLKMDFLGLRNLTVIGDAIDNIRT
NRGTDLDLDTLPLEDDATYELLSKGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAVLALY
RPGPMGMNAHNDYADRKNGRQDITPIHPELEEPLREVLAETYGLIVYQEQIMRIAQVVAG
YSMGRADVLRKAMGKKKLEVLQKEYEGFREGMHANGFSDPAVKALWDTILPFAGYAFNKS
HAAGYGLVSFWTAYLKANYPAEYMAGLLTSTGDDKDKAAIYLADCRRLGITVLPPDVNSS
QHNFVSVGEDIRFGLGGVRNVGTNVIASIVASRTQKGPFADFSDYLAKVDQVGCGKKVVE
SLIKAGAYDSLGHPRKGLLLVHADAIDAVMSTKKAEAIGQFDLFGGDGADAGIASVFDVK
VPAEEWETKHRLALEREMLGLYVSGHPLKGVEHALNAQADTPIPNILDGTVKDGAQVTVG
GILASVTRRVNKNGEPWASAQLEDMVGGIEVLFFPKSYSVLGTDVSEDAIVLVKGRVAVR
DDKISLIANDLAVPELSAIGVDKPLQLSMQSRQCTATKVESLKRVLASHPGTSDVHLKLV
SDRKEPMVLQLDDALRVAPTSALMGDLKALLGPNCLS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtggccggctcgttcgtgcacctgcacacccacaccgagtactccatgctcgacggtgcg
gccaagatcggccccctgttcgacgaggcccagcgcctcgggatgccggcggtcgggatg
accgaccacggcaacatgtacggggcgagcgagttctacacccaggccaccgcgcacggc
atcacgcccgtcatcggcatcgaggcctacgtggcgccggagtcgcggctgagcaccaag
cgcgtgctctggggcgacgcgagccagaagtccgacgacgtgtccggctccggcgcgtac
acccacctgaccatggtcgcggagaacgccaccggcctgcgcaacctgttcgcgctctcc
agccgagcctccatcgagggccagctgggcaagtggccgcggatggacgccgagatcatc
gccgagcacgccgcggggatcatcgcgaccaccggctgcccgtcgggcgaggtgcagacg
cggctgaggctgggccaggagaagcaggcgctggaggccgccgcccggtggcaggacatc
ttcggcaaggagaacttcttcctcgagctgatggaccacggcctgtccatcgagcgccgc
gtccgcgaggggctgctcgaggtgggccgcgcgctcggcatccccgcgctggccaccaac
gactgccactacgtcaccaaggacgcggcgagcaaccacgaggcgctgctctgcatccag
acgggcaagacgctctcggaccccacccgcttcaagttcgacggcgacggctactacctc
aagtcggccgaggagatgcgcgagctgttcgcggacgtcgagggcgcctgcgacaacacc
ctcgcgatcgccgagcgcgtgcagccctacgacgaggtgtggtccaagcgcgaccgcatg
cccgtcttcccggtccccgacggctcgacgcaggacgagttcctccgcgacgaggtcctc
gccgggctggaccgacgcttcccggacggggtgcccgacggctaccgcccgcgcgcggag
ttcgagctcggcgtcatccgggacaagggcttccccgcgtacttcctcatcgtcgccgac
ctcatcacccacgccagggaggtgggcatccgggtcggccccggccgtggttcggccgcc
ggctccctggtcgcgtactcgctgggcatcaccaacatcgaccccatcccgcacgggctg
ctcttcgagcggttcctcaacccggagcgaccgtcggacccggacatcgacatcgacttc
gacgaccgtcgccgcggggagatggtccgctacgccaccgagcggtggggtgtggacaag
gtcgcccaggtcatcaccttcggcaccatcaagaccaaggccgccatcaaggactcggcg
cgggtcacgttcggccagccggggttctccatggccgaccgcatctccaaggccctgccc
ccgcccgtcatggccaaggacatctcgctccagggcatcaccgaccccacccacgagcgc
tacaaggaggccgccgaggtccgcgcgctcatcgagaccgaccccgacgtcgccaagatc
taccagaccgcccgtggcctggaggggctgatccgcaacgccggtgtgcacgcctgtgcg
gtgatcatgtcctcggagcccctgatggacgccatccccatgtggcggcgcccgcaggac
ggtgcgctgatcaccgggtgggcctacccggactgcgagtccatcggcctgctgaagatg
gacttcctcggcctgcgcaacctcaccgtcatcggcgacgccatcgacaacatccggacc
aaccgcggcaccgacctcgacctggacacgctgccgctggaggacgacgccacctacgag
ctgctgagcaagggcgacaccctgggggtgttccagctggacggtggacccatgcgggac
ctgctgcgccgcatgcagcccaccgggttcaacgacatcgtcgcggtgctcgcgctgtac
cgccccgggcccatgggcatgaacgcgcacaacgactacgccgaccgcaagaacggccgc
caggacatcacgcccatccaccccgagctggaggagccgctgcgggaggtcctcgccgag
acctacgggctgatcgtgtaccaggagcagatcatgcgcatcgcgcaggtggtcgccggg
tactccatgggccgtgccgacgtgctgcgcaaggccatgggcaagaagaagcttgaggtc
ctgcagaaggagtacgagggcttccgggaaggcatgcacgccaacgggttctccgaccct
gccgtgaaggccctgtgggacaccatcctcccgttcgccgggtacgcgttcaacaagtcc
cacgccgcgggctacgggctggtgagcttctggacggcgtacctcaaggccaactacccc
gccgagtacatggccgggctgctcaccagcaccggggacgacaaggacaaggccgcgatc
tacctggccgactgccgccgcctcggcatcacggtgctgccgccggacgtcaactcctcc
cagcacaacttcgtctccgtcggcgaggacatccgcttcggcctcggtggtgtgcgcaac
gtcggcaccaacgtgatcgcctcgatcgtggcctcgcgcacccagaagggacccttcgcc
gacttctccgactacctcgccaaggtcgaccaggtcggctgcggcaagaaggtcgtcgag
tcgctcatcaaggccggcgcctacgactccctcggtcacccccgcaagggcctgctgctc
gtgcacgccgacgccatcgacgcggtgatgagcaccaagaaggccgaggccatcggccag
ttcgacctcttcggtggggacggcgccgacgccggcatcgcgagcgtgttcgacgtcaag
gtccccgccgaggagtgggagaccaagcaccgcctcgccctggagcgggagatgctgggg
ctctacgtgtccgggcaccccctcaagggtgtcgagcacgcgctcaacgcccaggccgac
acccccatcccgaacatcctcgacggcacggtcaaggacggcgcccaggtgaccgtgggc
ggcatcctcgccagcgtcacccgccgggtgaacaagaacggcgagccgtgggcgtcggca
cagctggaggacatggtcggcgggatcgaggtgctgttcttcccgaagagctactcggtg
ctgggcacggacgtctccgaggacgcgatcgtgctggtgaagggccgggttgccgtgcgc
gacgacaagatctcgctgatcgcgaacgacctcgccgtcccggagctctccgccatcggg
gtggacaagccgctgcagctgagcatgcagagccggcagtgcacggcgaccaaggtcgag
tccctcaagagggtgctggccagccaccccggcacctccgacgtccacctcaagctggtc
agcgaccgcaaggagccgatggtgctgcagctggacgacgccctgcgcgtggcccccacc
tcggccctgatgggcgacctcaaggcgctgctcgggccgaactgcctcagctga
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