Rhodococcus antarcticus: RHODO2019_09820
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Entry
RHODO2019_09820 CDS
T09186
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00470
D-Amino acid metabolism
rant00550
Peptidoglycan biosynthesis
rant01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHODO2019_09820 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHODO2019_09820 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rant01011
]
RHODO2019_09820 (murD)
Enzymes [BR:
rant01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RHODO2019_09820 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rant01011
]
Precursor biosynthesis
Amino acid ligase
RHODO2019_09820 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
AlaDh_PNT_C
MurD-like_N
RepB_primase_C
HcgC
Motif
Other DBs
NCBI-ProteinID:
UZJ23526
LinkDB
All DBs
Position
complement(2052694..2054070)
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AA seq
458 aa
AA seq
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MQVSELDGAHVLVAGARVTGTSVVRALTRLGARCTVSDSNPAELEAVAVLGAATALDLRT
PPEGVDLVVTVPGFRPTAPLLVAAAAAGLPVWGDVELAWRCDRAEVFGPSRRWLAVTGTN
GKTTTTTMLEAVLRADGRRTVACGNIGLTVLDALTDAAGFTDLAVELSSFQLHWAPSLRP
SAGVVLNVAEDHLDWHGGREAYAAAKAGVLTGDVAVLGLDDPGASALVPTAARTVGFRLG
EPARGEMGYVDGVLTDRAFAEDEPLVAAADVLPAGPPGRLDAAAAAALARAAGVSAAAVG
AGLRAHRPGAHRGAVVATRRGVRYVDDSKATNPHAAAASLAAHPRVVWVAGGLLKGASVE
DLVVTAAPGLAGVVLLGRDRGVLASALARHAPEVPVVEVAAGDDAAMVDVVRAAAAMASP
GDTVLLAPAAASMDMFTDYAHRGRAFADAALALTEDAS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtcagcgagctcgacggggcgcacgtcctcgtcgccggcgcccgggtcaccggc
acctccgtcgtgcgggccctgacccgtctgggggcgcgctgcaccgtcagcgacagcaac
cccgccgagctcgaggccgtcgcggtcctcggtgctgcgaccgcgctcgacctgcggacc
ccgcccgagggggtcgacctcgtggtgaccgtgcccgggttccggcccaccgccccgctg
ctggtggcggccgcagcggccgggctgccggtgtggggcgacgtcgagctcgcctggcgc
tgcgaccgtgcggaggtgttcggcccgagtcggcgctggctcgccgtcaccgggaccaac
ggcaagacgacgacgacgacgatgctcgaggcggtgctgcgggccgacggccgccgcacc
gtggcctgcggaaacatcggtctcaccgtgctcgacgcgctcaccgacgccgccgggttc
accgacctggccgtcgagctctcctccttccagctgcactgggcgccgtcgctgcgcccg
tcggccggggtcgtgctcaacgtcgcggaggaccacctggactggcacggcggccgggag
gcctacgccgccgcgaaggccggggtgctgacgggcgacgtggccgtgctcgggctggac
gaccccggcgcatcggcgctggtcccgaccgccgcccggacggtgggcttccgcctcggc
gaaccggcccggggcgagatgggctacgtcgacggggtcctcaccgaccgggccttcgcc
gaggacgagcccctggtggcggcagccgacgtgctgcccgccgggccgcccgggcgactc
gacgcggccgccgccgccgcgctggcccgcgcggccggggtgtccgcggccgcggtcggt
gcgggtctgcgcgcccaccgcccgggggcgcaccgcggtgcggtggtggccacccggcgt
ggggtgcgctacgtggacgactccaaggctaccaacccgcacgcggccgcggcctccctg
gccgcgcacccccgggtggtctgggtggccggtgggctgctcaagggtgcgtcggtggag
gacctcgtggtcaccgccgcgccggggctggcgggcgtggtgctcctcggccgggaccgc
ggtgtgctcgcgtcggccctcgcgcgacacgcgccggaggtccccgtcgtggaggtcgcg
gcgggagacgatgcggccatggtcgacgtcgtgcgtgccgcagccgcgatggccagcccg
ggggacaccgtgctcctggccccggccgcagcctcgatggacatgttcaccgactacgcc
caccgcggccgcgcgttcgccgacgccgcgctcgccctgaccgaggacgcctcgtga
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