Rhodococcus antarcticus: RHODO2019_11850
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Entry
RHODO2019_11850 CDS
T09186
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_11850
Enzymes [BR:
rant01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RHODO2019_11850
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RHODO2019_11850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
UZJ23882
LinkDB
All DBs
Position
complement(2433100..2434587)
Genome browser
AA seq
495 aa
AA seq
DB search
MTVDDAPLWVFADQLGPHVHSAPEHAHRQVLLVEATSALRRRRYHRQKLHLVLSGLRHLA
EELGDRAVHLRTDTYREALEQLGRPVVVHEPTSRAAEALVHRLAAEGLVAAVLPTPTFAL
GRAEFAEWAAGRESFRMEAFYREQRRRFDVLMDAGEPVGGTWNLDAENRERPPKGRTTLG
VEPPWWPTEDAVDEQVRADLDAMELDTVGVDGPRLFPVTRSEAEQALEQFVDTRLADFGP
HEDAVMAGDWPMAHSLLSVPMNLGLLHPLEVVHAAEAAHTRGDAPLASVEGFVRQVLGWR
EYVWHLYWHLGEDYLDRNALDAHVPLPDWLTELDGDAVTAACLADAVNGVRDRGWVHHIP
RLMVLGNHALQRGYDPRALTDWFATAFVDGFAWVMPVNVIGMSQHADGGLIATKPYAAGG
AYLNKMTDHCGGCAYDPKVRVGEKACPFTAGYWAFTHRHRERLAANHRTARAVASMNRLS
DLDAVLAQESLREEL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttgatgacgcccccctctgggtcttcgccgaccagctcggcccgcacgtgcac
tcggcccccgagcacgcccaccggcaggtgctgctcgtcgaggccacctccgcgctgcgc
cgacgccgctaccaccgccagaagctgcacctggtgctctcggggctgcggcacctggcc
gaggagctcggtgaccgggccgtccacctgcgcaccgacacctaccgcgaggccctcgag
cagctgggtcggccagtggtggtgcacgagcccacctcccgtgcggccgaggcgctcgtg
caccggctcgccgccgagggactggtggcggccgtgctgcccacccccaccttcgccctg
ggccgggccgagttcgcggagtgggcggccggtcgggagagcttccgcatggaggcgttc
taccgcgagcagcgccgccggttcgacgtgctgatggacgccggggaacccgtcggcggt
acgtggaacctcgacgccgagaaccgggagcgcccgcccaaggggcgcaccaccctgggc
gtggagccgccctggtggcccaccgaggacgcggtcgacgagcaggtgcgcgccgacctc
gacgccatggagctggacacggtgggggtggacgggcctcggctgttccccgtcacccgg
agcgaggcggagcaggccctcgagcagttcgtcgacacccggctcgcggacttcgggccc
cacgaggacgccgtgatggccggcgactggcccatggcccactcgttgctcagcgtcccg
atgaacctgggcctgctgcacccgctcgaggtggtgcacgccgccgaggccgcccacacg
cggggtgacgcccccctggccagcgtggagggcttcgtccgccaggtgctgggctggcgg
gagtacgtgtggcacctctactggcacctgggcgaggactacctcgaccgcaacgccctg
gacgcccacgtgccgctgccggactggttgaccgagctcgacggggacgcggtgaccgca
gcctgcctggccgacgcggtgaacggggtccgcgaccgcggctgggtgcaccacatcccg
aggctgatggtgctgggcaaccacgccctgcagcgcggctacgacccccgcgcgctcacc
gactggttcgccaccgcgttcgtcgacggcttcgcctgggtgatgccggtgaacgtcatc
gggatgagccagcacgccgacggcggcctcatcgccaccaagccctacgccgcgggcggg
gcgtacctcaacaagatgaccgaccactgcggcgggtgcgcgtacgaccccaaggtccgg
gtgggggagaaggcctgcccgttcaccgccgggtactgggccttcacccaccgccaccgc
gagcgcctggccgccaaccaccggacggcccgcgccgtggcctcgatgaaccgcctctcc
gacctcgacgccgtgctcgcccaggagtcgctcagggaggagctctag
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