Rhodococcus antarcticus: RHODO2019_12105
Help
Entry
RHODO2019_12105 CDS
T09186
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03420
Nucleotide excision repair
rant03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RHODO2019_12105
03430 Mismatch repair
RHODO2019_12105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_12105
Enzymes [BR:
rant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHODO2019_12105
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHODO2019_12105
MMR (mismatch excision repair)
Other MMR factors
RHODO2019_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
RsmF-B_ferredox
Motif
Other DBs
NCBI-ProteinID:
UZJ26643
LinkDB
All DBs
Position
complement(2483519..2486917)
Genome browser
AA seq
1132 aa
AA seq
DB search
MGPARLNEALGLPAPTAQQVAVIEAELSPSLVVAGAGAGKTETMAARVVWLVANDLVRPE
QVLGLTFTRKAAQQLAARIRGRLRVLADSAVLDEVDPTGGLRARVRGGEPEVSTYHAYAG
RLLAEHGLRLPVEPSARLLSETASWQVAHRVVSTWSDPLAVDLTPATVVARVRGLAGQLA
EHLVDAEQLRAASTELEHLVATLPRGPGQRAAPSAKLGEIVAAQHQRLALLPLLERLTET
MRRESSLDFGSQMSLAATVARDHPEVGLAERGRFRAVLLDEYQDTGHAQRVLLRALFGAG
VDPSLALTAVGDPIQSIYGWRGASAANLPRFAADFPLDRSGTPAPRRELLTSWRNPPEAL
TLANGVSELLRATGVPVSELQAKPAAGAGEVRLALTATVAEELTWLAGHVRRRYDEVLER
TAAAGDRKPPTAAVLVRRRADMAAVADALRAEGLPVEVVGLGGLLDTPEVRDVVSVLRLL
ADPLAGTAAARVLTGARWQLGAADLAALWRRARELAIRGGGTELGEAPDEEALRAALASA
HPGEQAEQAGLADALADPGRRERYSVAGWSRITAVAEELASLRERIGQPLPELVAEVERT
LRVDVEVSARPGGVAVGRTHLDAFADVVVGWSTSVGVPSLPGLLSYLAAAQDEEDGLSPG
EVEVDPDRVQVLTVHAAKGLEWEVVAVPHLCTGVFPAAKRSSSWLRNPVELPSHLRGDAA
DPEADASTGAGVGVPVLDLSGCSTRKDLEAVLAAHESAVDARRLEEERRLLYVALTRTEH
TLLVSGSHWGATGSRPRVPSEFLVELRALVEGTGGVPGAGTVDEWAPAPEEGTVNPASEQ
VRTARWPVDPLGQRRAAVTAGAGLVRDALEALPTGDRGNPTPVEQPRGGERPPDDEQPAD
PDGWVTDVDALLAERERRRSRVREVELPAQLSVSQLVQLRSDPVEFAARLRRPLPYPPNP
LARRGTEFHAWVERRFGATRLLDLDDLPGAGDEGAAPDADLAALQAAFLRSPWADRRPLE
VEVPFETELAGTVVRGRIDAVFGEPDGRFTVVDWKTGAVPDAARRPALLVQLAAYRLAWA
ELAGVAPERVDAAFVYVRHGHTLAAPDLLDAAGLQALLVDATAEPDATAEPG
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
ctgggaccggcccggctcaacgaggccctcgggctgcccgcgcccaccgcccagcaggtg
gccgtgatcgaggccgagctgagcccgtcgctcgtcgtggccggggccggggcgggcaag
accgagaccatggcggcgcgcgtcgtgtggctggtcgcgaacgacctggtgcgcccggag
caggtgctgggcctcacgttcacccgcaaggccgcccagcagctggcggcgcgcatccgg
ggtcggctgcgggtgctggccgacagcgcggtcctcgacgaggtcgacccgaccggtggg
ctccgcgcccgggtgcgcggtggtgagcccgaggtgagcacctaccacgcctacgccggg
cggctcctggccgagcacggcctccggctgccggtcgagccctcggcgcggctgctcagc
gagaccgcgtcgtggcaggtggcccaccgggtggtgagcacgtggtcggacccgctggcg
gtcgacctgacccccgcgaccgtggtggcccgggttcgcggtctggcggggcagctcgcc
gagcacctcgtcgacgccgagcagctccgggccgcgagcaccgagctcgagcacctggtg
gcgacgctgccgcgcgggcccggtcagcgcgcggcgccctcggccaagctgggtgagatc
gtcgccgcccagcaccagcggctggccctgctgccgctgctggaacggctcaccgagacc
atgcggcgggagtcctccttggacttcggcagccagatgtcgctggccgccaccgtggcg
cgtgaccacccggaggttggtctggccgagcgcgggcgcttccgggcggtgctgctcgac
gagtaccaggacaccgggcacgcccagcgcgtcctgctgcgcgccctgttcggcgccggg
gtggacccctccctggcgctcaccgcggtgggtgacccgatccagtccatctacggctgg
cgcggggcctcggcggcgaacctcccgcgcttcgccgcggacttcccgctggaccgctcc
ggcacgcccgccccccggcgcgagctgctgacgagctggcgcaacccgcccgaggcgctg
accctggccaacggggtctccgagctgctgcgcgcgaccggcgtgcccgtctccgagctg
caggccaagcccgcggccggagccggcgaggtgcgcctggcgctcaccgccaccgttgcg
gaggagctgacctggctggccggtcacgtccggcggcggtacgacgaggtgctggagcgg
acggcggctgccggcgaccggaagccgcccaccgccgccgtgctggtgcgccgccgggcg
gacatggccgcggtggcggacgcgctgcgcgcggaggggctcccggtggaggtcgtgggc
ctgggcgggctgctcgacacgcccgaggtgcgcgacgtggtcagcgtgctgcggctgctg
gccgacccgctcgcgggaaccgccgcggcccgggtcctgaccggtgctcgctggcagctc
ggggcggccgacctggcggcgctgtggcgccgggcgcgcgagctcgccatccgcgggggc
ggcaccgagctgggtgaggcgccggacgaggaggcgctacgagcggccctggcctcggcg
caccccggcgagcaggcggagcaggccgggctggccgatgccctcgccgaccccggccgc
cgggagcgctactccgtcgcggggtggagccgcatcaccgccgtcgccgaggagctcgcc
tcgctccgcgaacggatcggccagccgctgcccgagctggtcgcggaggtcgagcgcacc
ctgcgggtggacgtcgaggtgtcggcgcgcccgggcggggtggccgtgggtcggacgcac
ctcgatgcgttcgcggacgtcgtggtcggctggagcacctccgtgggggtgccgagcctg
ccgggtctgctcagctacctcgccgcggcgcaggacgaggaggacgggctgagccctggc
gaggtcgaggtggacccggaccgggtgcaggtgctcaccgtgcacgcggcgaaggggttg
gagtgggaggtggtcgccgtcccgcacctgtgcaccggggtgttcccggcggccaagcgg
agctcgagctggctgcgcaaccccgtggagctgccctcgcacctgcggggcgatgccgcc
gaccccgaggccgacgccagcacgggggccggggtgggcgtccccgtgctcgacctgtcc
ggctgcagcacccgcaaggacctcgaggcggtcctggccgcgcacgagtcggcggtggac
gcccggcgcctggaggaggagcggcggctgctctacgtggcgctgacccggaccgagcac
acgctgctggtctccggcagccactggggcgccaccgggagcaggccccgggtgccctcg
gagttcctggtggagctgcgcgcgctggtggagggaaccggtggtgtccccggcgcgggc
acggtcgacgagtgggcaccggcgccggaggagggcacggtgaaccccgcgagcgagcag
gtccgcaccgcgcggtggccggtggacccgctggggcagcggcgggctgcggtgaccgcc
ggtgccgggctggtccgcgacgcgctcgaggcgctcccgacgggggaccgcggcaacccg
acgcccgtcgagcagccccggggcggcgagcgcccgcccgacgacgagcagccggccgac
ccggacggctgggtcaccgacgtggacgcgctgctggccgagcgcgagcgtcggcgcagc
cgggtgcgcgaggtggagctgcccgcccagctctcggtgagccagctggtgcagctgcgg
agcgacccggtggagttcgcggcgcggctgcgtcggccgctgccctacccgccgaacccg
ctcgcccggcgcggcaccgagttccacgcgtgggtcgagcggcggttcggggccacccgg
ttgctggacctcgacgacctccccggagccggggacgagggtgcggcccccgacgccgat
ctcgcggcgctgcaggccgcgttcctgcgctcgccgtgggccgaccgccgaccgctggag
gtggaggtgcccttcgagaccgagctggccggcactgtcgtccgcggccgtatcgacgcc
gtgttcggcgagcccgacgggcggttcacggtggtggactggaagaccggtgcggtgcct
gacgccgcccggcgaccggcgctgctcgtccagctcgcggcctaccggctggcctgggcg
gagctggccggggtggcgcccgagcgggtggacgccgccttcgtctacgtccggcacggc
cacaccctcgccgccccggacctgctcgacgccgcggggctgcaggccctgctggtcgac
gcgaccgccgaacccgacgcgaccgccgaacccggctag
DBGET
integrated database retrieval system
