Rhodococcus antarcticus: RHODO2019_12365
Help
Entry
RHODO2019_12365 CDS
T09186
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00300
Lysine biosynthesis
rant01100
Metabolic pathways
rant01120
Microbial metabolism in diverse environments
rant01230
Biosynthesis of amino acids
Module
rant_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHODO2019_12365 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rant01002
]
RHODO2019_12365 (dapE)
Enzymes [BR:
rant01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RHODO2019_12365 (dapE)
Peptidases and inhibitors [BR:
rant01002
]
Metallo peptidases
Family M20
RHODO2019_12365 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UZJ23973
LinkDB
All DBs
Position
complement(2532155..2533228)
Genome browser
AA seq
357 aa
AA seq
DB search
MKPLDLTADVVSLTAALVDAPSVSGDEEVLADAVEAALRAQAPALEVVRSGNAVLARTNL
GRPTRVLLAGHLDTVPIADNVPSRREGPLLHGCGTVDMKSTDAVFLHLAASVADPVHDVT
LVFYDCEEVEATRNGLGRIERELPDWLAADLAVLGEPTDGLVEAGCQGTMRVRVTTSGVR
AHSARSWLGRNAIHGAGAVLRVLEDYLPRDVVIDGCTYREGLNAVKIVGGVAGNVVPDVC
EVDVNFRFAPDRSAAQAEAHVREVLAGLDADVVLTDMSPGALPGLGSAAAQGFVTAAGGT
VRAKYGWTDVSRFSALGIPALNYGPGDPNLAHTRDEHVVVAKIVECEAVLRRYLTTP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccctcgacctcaccgccgacgtggtcagcctgaccgccgccctcgtggacgca
ccgagcgtctccggcgacgaggaggtgctcgccgacgccgtggaggcagcgctgcgcgcc
caggccccggccctcgaggtggtgcgcagcgggaacgcggtgctggcgcggacgaacctg
ggccggcccacccgggtgctgctggccgggcacctggacacggtgcccatcgcggacaac
gtgcccagccgccgcgagggcccgctgctgcacggctgcggcaccgtggacatgaagtcc
accgacgcggtgttcctgcacctggccgcgagcgtcgccgatcccgtgcacgacgtgacg
ctggtgttctacgactgcgaggaggtcgaggccacccgcaacgggctgggccgcatcgag
cgcgagctccccgactggctggcggcggatctcgcggtgctcggcgaacccaccgacggc
ctggtcgaggcgggttgccagggcacgatgcgggtgcgggtcaccacctccggcgtgcgg
gcgcactcggcgcgcagctggttggggcgcaacgcgatccacggtgcgggcgcggtgctg
cgggtgctcgaggactacctcccgcgggacgtggtcatcgacgggtgcacctaccgggag
ggcctcaacgccgtgaagatcgtcggcggggtggccggcaacgtggtcccggacgtgtgc
gaggtggacgtgaacttccgcttcgccccggaccgcagcgcggcccaggcggaggcgcac
gtgcgggaggtgctcgcgggcctcgacgcggacgtggtgctcaccgacatgtcaccgggg
gcgctgccgggcctgggatcggctgcggcgcagggcttcgtgacggcagccggcgggacg
gtgcgggccaagtacgggtggaccgacgtgtcccggttctcggcgctgggcatccccgcg
ctgaactacggccccggggacccgaacctggcgcacacgcgcgacgagcacgtcgtcgtc
gcgaagatcgtcgagtgcgaggccgtgctgcgccgctacctcacgaccccttag
DBGET
integrated database retrieval system
