Rhodococcus antarcticus: RHODO2019_12660
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Entry
RHODO2019_12660 CDS
T09186
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHODO2019_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rant03000
]
RHODO2019_12660
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_12660
Enzymes [BR:
rant01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RHODO2019_12660
Transcription factors [BR:
rant03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RHODO2019_12660
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHODO2019_12660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
UZJ24028
UniProt:
A0ABY6NYF5
LinkDB
All DBs
Position
2593389..2594879
Genome browser
AA seq
496 aa
AA seq
DB search
MTTALDHDSCYRAVASRDARFDGCFVTAVRTTGIYCRPSCPAITPRPGNVSFLPTAAAAQ
HAGYRACRRCLPDAAPGSPEWDLRGDLAARAVRLIADGVVERSGVAGLAADLGYSERQLN
RVLTEQLGAGPLALARAHRAHTARLLLQTTALPVADVAFAAGFASVRQFNDTVREVFAVT
PSVLRAEVARPRGDGAPPVAGVIRLRLPFRVPMDAGWTEWFLAGHALGGAESWCDGEYAR
TLALPHGSGVARVRLEPTHVALQLRLADLRDLGAAVTRVRRLLDLDADPVAVDAALTADP
ALAPSVAATPGIRVLGSVDGAEVLLRTVLGQQVSLAAARTAGTRLVAALGPPLAAPDGAL
THLFPAAEVVAQRGHEVLTGPARRVATVIRVATALADGSLALHPGRDGTELRAELLALPG
IGPWTADYVLMRVLGDPDVLLGTDLVLRQGVARLGLPRGARELAAHATRWSPWRSYAGMH
LWKTELDARARTKETT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacggccctcgaccacgacagctgctaccgcgccgtcgcctcccgcgacgcccgg
ttcgacggctgcttcgtgaccgccgtgcgcaccacgggcatctactgccgcccgagctgc
ccggccatcaccccccggcccggcaacgtcagcttcctgcccaccgccgcggccgcccag
cacgccggctaccgggcgtgccgccgctgcctgcccgacgccgcgcccggctcgccggag
tgggacctgcgcggcgacctggcggcccgggccgtccgcctcatcgccgacggcgtggtg
gagcgctccggggtggctgggctcgcggccgacctcggctactccgagcgccagctcaac
cgggtgctcaccgagcagctcggggccggcccgctcgccctggcccgcgcgcaccgcgcg
cacaccgcgcggctgctgctgcagaccaccgcgctgcccgtggccgacgtcgccttcgca
gccgggttcgccagcgtccggcagttcaacgacaccgtgcgcgaggtgttcgcggtgacc
ccgagcgtgctgcgcgccgaggtcgcccgcccgcggggggacggcgcgccaccggtggcc
ggggtgatccggctgcggctgccgttccgggtgccgatggacgccgggtggacggagtgg
ttcctggccgggcacgccctgggcggtgcggagagctggtgcgacggcgagtacgcccgc
accctggccctgccgcacggctcgggggtggcccgggtgcggctggagcccacccacgtg
gccctgcagctgcgcctggccgacctgcgcgacctcggcgcggccgtcacccgcgtgcgg
cggctgctcgacctcgacgcggacccggtggccgtcgacgccgccctgaccgccgacccg
gcgctggccccgagcgtcgccgccaccccgggcatccgggtgctgggcagcgtcgacggc
gcggaggtgctgctgcgcaccgtgctcggccagcaggtgtccctggccgcggcccgcacg
gccggaacacgcctggtggcggccctgggccccccgctcgccgcgccggacggtgcgctg
acgcacctgttcccagcggcggaggtggtggcgcagcgcgggcacgaggtgctcaccggg
cccgcccggcgggtggccacggtgatccgggtggccacggccctggccgacggatcgctg
gccctgcaccccgggcgcgacggcaccgagctgcgcgccgagctgctggccctgcccggc
atcggtccctggacggccgactacgtgctgatgcgcgtgctcggcgatcccgacgtgctg
ctgggcaccgacctggtgctgaggcagggcgtcgcgcgcctcgggctgccccgcggggca
cgcgagctggccgcgcacgcgacccggtggagcccctggcgctcctacgcggggatgcac
ctgtggaagacggagctcgacgcacgggcccggacgaaggagacgacgtga
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