Rhodococcus antarcticus: RHODO2019_12910
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Entry
RHODO2019_12910 CDS
T09186
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHODO2019_12910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_12910
Enzymes [BR:
rant01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RHODO2019_12910
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHODO2019_12910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UZJ24067
LinkDB
All DBs
Position
complement(2645538..2646278)
Genome browser
AA seq
246 aa
AA seq
DB search
MPDSIAQVDHDVVACRRCPRLVAWREEVAATRRAAFRDETYWGRAVPSFGPADASVLVVG
LAPAAHGANRTGRMFTGDRSGDVLVAAMHAAGLANQPTSTRADDGLELIGTRMVAPVHCA
PPANRPTPAERDACSPFLLRELELLRPTVRAVVVLGGFGWQAFLPVAARAGWVVPVPRPR
FGHGARVVLHHTDGGPPLTVLGCYHVSQQNTFTGRLTPAMVTDVLVAARLVATTGHPPGD
GATPPS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgccggactcgatcgcgcaggtggaccacgacgtcgtcgcgtgccggcgctgcccccgc
ctggtggcctggcgcgaggaggtcgccgccacccggcgagccgcgttccgggacgagacc
tactggggccgcgccgttcccagcttcgggccggccgacgcgtcggtgctggtggtgggt
ctggcgccggctgcgcacggggcgaaccggacggggcggatgttcaccggcgaccgctcc
ggcgacgtcctggtggccgcgatgcacgccgccgggctggccaaccagcccacgagcacc
cgcgcggacgacgggctggagctgatcggcacccggatggtcgcgcccgtgcactgcgcg
ccaccggccaaccggcccaccccggccgagcgcgacgcctgctcgcccttcctgctccgc
gagctcgagctgctgcgccccaccgtccgtgccgtggtggtgctcgggggcttcggctgg
caggcgttcctgccggtggccgcccgggccggatgggtggtgccggtgccgcgcccgcgc
ttcggccacggtgcgcgggtggtcctccaccacaccgacggcggcccgccgctgaccgtc
ctgggctgctaccacgtcagccagcagaacaccttcaccggccgcctcaccccggccatg
gtcaccgacgtgctggtcgcggcccgtctggtcgccaccacggggcacccaccgggtgac
ggcgccaccccgccttcgtga
DBGET
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