Rhodococcus antarcticus: RHODO2019_13900
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Entry
RHODO2019_13900 CDS
T09186
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_13900
Enzymes [BR:
rant01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHODO2019_13900
DNA repair and recombination proteins [BR:
rant03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHODO2019_13900
Prokaryotic type
RHODO2019_13900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZJ24241
UniProt:
A0ABY6NXZ1
LinkDB
All DBs
Position
complement(2846469..2847839)
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AA seq
456 aa
AA seq
DB search
MDEAAVIWFRRDLRLGDLPTLTEAAVRAERSLALFVLDDALLGPAGAPRTTFLFRCLREL
DAALDGRLLVVRGDPVDVLPRVAAAVGASSVHVSADFAPYGTRRDTAVEQALGEVELVRT
GSPYAVAPGRVTKDDGDPYRVFTPFRRAWAEHGWRAPADTGAGTVRWIDPGEKDGGPRRV
RIPEDVALGEVELPAAGEAAASARWAEFLQSDVTAYDDERNRPDHDATSRMSPYLKYGCV
HPRTMLADLKGRTGSGATTFTTELAWRDFYADVLHRRPDTAREHYDRRFDKIRYDDGAAA
RQAFDAWATGRTGFPIVDAGMRQLLAQGWVHNRVRMIVASFLTKDLHLSWTWGARHFMRH
LVDGDLSSNQHGWQWTAGSGTDASPYFRVFNPTTQGEKFDPQGDYVRRWVPELRGVAGKA
VHTLPGGVPPGYVEPLVDHKHERLVALDRYAALKDG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaggcagcggtcatctggttccggcgcgacctgcgcctgggcgacctgcccacc
ctcaccgaggcagcggtcagggccgagcgctcgctggccctgttcgtgctggacgacgcg
ctgctgggcccggccggggcaccgcgcaccacgttcctgttccgctgcctgcgcgagctc
gacgcggccctggacggacggctgctggtggtgcgcggcgacccggtggacgtgcttccc
cgggtggcggcggcggtgggggcctccagcgtgcacgtctcggccgacttcgccccgtac
ggcacccgccgcgacaccgccgtcgagcaggccctgggcgaggtcgagctggtgcgcacc
ggcagcccgtacgcggtggccccgggtcgcgtcaccaaggacgacggcgacccgtaccgg
gtgttcacccccttccgccgggcgtgggccgagcacggctggcgtgccccggcggacacg
ggcgcgggcacggtccgctggatcgacccgggcgagaaggacggtggaccgcgacgggtg
aggatccctgaggacgtggcgctgggcgaggtggagctgccggcggcgggggaggccgcg
gcgtcggcccgctgggcggagttcctgcagtccgacgtcacggcctacgacgacgagcgc
aaccgccccgaccacgacgccaccagccgcatgtcgccctacctcaagtacggctgcgtc
cacccgcgcacgatgctcgcggacctgaagggccgcaccgggtccggggccaccacgttc
accaccgagctggcctggcgcgacttctacgccgacgtcctgcaccgccgcccggacacc
gcgcgcgagcactacgaccgtcgcttcgacaagatccgctacgacgacggggcggccgcc
cgacaggcgttcgatgcgtgggcgaccggtcgcacgggcttcccgatcgtcgacgccggg
atgcgccagctgctcgcgcagggctgggtgcacaaccgggtgcggatgatcgtggccagc
ttcctgaccaaggacctgcacctgagctggacgtggggtgcacggcacttcatgcgccac
ctcgtcgacggggacctgtcgtccaaccagcacggctggcagtggacggcgggctcgggc
accgacgcgtcgccgtacttccgggtgttcaacccgacgacgcagggggagaagttcgac
ccgcagggcgactacgtgcgccgctgggtgcccgagctgcgcggggtggcgggcaaggcc
gtgcacacgctgcccggcggggtgccacccgggtacgtcgagccgctcgtggaccacaag
cacgagcggctcgtcgcactggaccgctacgccgcgctcaaggacggctga
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