Rhodococcus antarcticus: RHODO2019_15465
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Entry
RHODO2019_15465 CDS
T09186
Name
(GenBank) PAS domain S-box protein
Organism
rant
Rhodococcus antarcticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
PAS
PAS_3
GGDEF
PAS_4
PAS_9
PAS_8
Diguanyl_cycl_sensor
DUF3459
GGDEF_GdpP
Motif
Other DBs
NCBI-ProteinID:
UZJ24511
LinkDB
All DBs
Position
complement(3167169..3169994)
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AA seq
941 aa
AA seq
DB search
MAGQGADSTVSVSPDRVLDGVPAAVVSTDVGGVVLSWNRGAERLYGWTAAEAVGRGVDEL
TLPNGWEPSAVRDSLASGRSWSGAFTARHRDGHSFRASVTTTPVHDDQGAVLALVGVSTR
AVEEPPLDRVQRELAAIVDSSVDAIVGVDVEGVITSWNPAATTLFGWTAAEVVGTSILAL
LPTVQAQRLRGLFAELVVGAVVPDRETTGWRKDGSSFAVDVRLSPLRDRGGDVVGYSGLC
RDISERSELRRVAEAERARLRAAQALAHVGSCELDLATGATAWSDESWRMLGVPPEPGAS
FDRFVDAVHPEDRAQVRGAVELMSSGHAPEAQEYRVVRPDGEVRWIREVFAVDHDTTGRA
ATVLGTKLDITDIRAAVEGRTAAEGILRQGFEHSAIGMLVSDRHGRTTTVNAAYLEIAGR
TEAELLGAQSSSWVHPEDAETAARPRAAMLRGELDTYSHEHRVVRPDGTVRWVRKTVSLI
RGSDGEPAFFLGQVQDVTDQKQVESELAHQAFHDPLTALPNRALLTDRVVQALARRSAGA
VTALFLDVDQFKVVNDSIGHAAGDELLVLVAQRLQSVVRPGDTLARFGGDEFVIVCDGLA
EADVELLGVRVAEAVRAPFALDGREVTVTVSGGIATSGAGCDAESLLRNADAAMYQAKAR
GRNCVVVFDDAMHHQATERLDTELQLRHALGRGELVVHYQPVLELPSGRVAGVEALVRWQ
HPVRGLLTPSAFMELAESTGLVVSIGEWVLETALAQVQRWRTSLPGGAELTVAVNLSARQ
VAAPDLTGLVRRVLDSSGIDPAAVHLEMTESVVMNDGAVYVDVLTELRALGVGLSVDDFG
TGYSSLSYLKRLPVDTLKVDRSFVDGLGGSDPHDRSIVVAVLSLASALGLQVVAEGVETD
AQLRELVALGVRSAQGYLWKRPVAAAELGPWLVERTQRTGR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtggccggacagggcgcggacagcacggtcagcgtgtcgccggaccgggtgctcgacggc
gtccccgcggccgtggtcagcaccgacgtcggtggtgtcgtcctctcgtggaaccggggc
gcggaacggctgtacgggtggacggccgccgaggcggtgggccgcggggtcgacgagctc
acgctgccgaacgggtgggagccgtcggcggtccgcgactccctggcgagcggccggtcg
tggtcgggggcgttcaccgcgcgccaccgcgacggccactccttccgggcgtccgtcacc
accaccccggtccacgacgaccagggcgcggtcctcgccctggtgggcgtctcgacacgg
gccgtcgaggaacccccgctcgaccgggtgcagcgcgagctcgccgccatcgtcgactcc
tcggtggacgcgatcgtcggggtcgacgtggagggcgtcatcaccagctggaaccccgcc
gcgacgaccctcttcgggtggacggcggccgaggtggtcggcacgtcgatcctggccctg
ctccccacggtccaggcccagcggctccgcgggctgttcgccgagctcgtggtgggtgcg
gtcgtccccgaccgggagaccaccggctggcgcaaggacggttccagcttcgccgtcgac
gtccggctctcgccgttgcgggaccgcgggggtgacgtggtggggtactccgggctgtgc
cgggacatctccgagcggtccgagctgcgccgggtggccgaggcggagcgggcccggctg
cgggccgcccaggcgctggcgcacgtgggcagctgcgagctcgacctggcgaccggcgcc
accgcctggtcggacgagtcctggcggatgctgggcgtgccgcccgagccgggcgcgagc
ttcgaccgcttcgtcgacgcggtgcaccccgaggaccgtgcgcaggtgcggggagcggtc
gagctgatgagctccggccacgccccggaggcccaggagtaccgcgtggtgcggccggac
ggggaggtccgctggatccgggaggtcttcgccgtcgaccacgacacgaccggtcgcgcc
gccaccgtgctggggaccaagctcgacatcaccgacatccgggccgccgtggagggccgc
accgcggcggagggcatcctgcgccagggcttcgagcactccgccatcgggatgctcgtg
tccgaccgccacgggcgcaccaccaccgtcaacgccgcgtacctcgagatcgccgggcgc
accgaggccgagctgctcggcgcccagagctcgagctgggtccacccggaggacgcggag
acggcggcgagaccccgcgccgccatgctccggggggagctcgacacctactcccacgag
caccgcgtcgtgcgcccggacggcaccgtgcgctgggtgcgcaagacggtctcgctcatc
cggggctccgacggcgagccggcgttcttcctcggccaggtccaggacgtcaccgaccag
aagcaggtggagtccgagctcgcgcaccaggccttccacgacccgctgaccgcgctgccc
aaccgcgccctgctcaccgaccgtgtcgtccaggccctcgcccgccggtccgccggtgcg
gtcacggcactgttcctcgacgtcgaccagttcaaggtggtcaacgacagcatcgggcac
gccgccggcgacgagctgctggtcctggtcgcgcagcgcctgcagtcggtggtccggccg
ggggacaccctggcccgcttcgggggcgacgagttcgtcatcgtctgcgacgggttggcc
gaggccgacgtcgagctgctgggggtgcgggtggccgaggcggtccgggcgccgttcgcg
ctggacggccgcgaggtgacggtgaccgtgagcggcgggatcgccacgtccggtgcaggt
tgcgacgccgagtccctgctgcgcaacgccgacgccgccatgtaccaggcgaaggcgcgc
ggccggaactgcgtggtggtcttcgacgacgcgatgcaccaccaggccaccgagcggctc
gacaccgagctgcagctccgccacgccctcggccggggcgagctggtggtccactaccag
ccggtgctggagctgcccagcggccgggtcgccggggtggaggccctcgtgcggtggcag
caccccgtgcggggactgctgacgccgtccgccttcatggagctcgcggagtcgaccggt
ctggtggtgagcatcggggagtgggtgctcgagacggccctggcccaggtgcagcgctgg
cggacgagcctgccgggtggtgcggagctcacggtggccgtgaacctatcggcccgccag
gtcgcggcgccggacctgaccggtctcgtccggcgggtgctggacagcagcggcatcgac
ccggcggccgtgcacctggagatgaccgagtcggtggtgatgaacgacggagccgtctac
gtcgacgtcctcaccgagctgcgcgccctgggtgtgggcctctcggtcgacgacttcggt
accggctactcctcgctgagctacctcaagcggctgccggtggacaccctgaaggtcgac
cgctccttcgtcgacggcctcggtggcagcgacccgcacgaccggtccatcgtcgtcgcc
gtgctgagcctcgcctcggcgctgggcctgcaggtggtggccgagggggtggagaccgac
gcgcagctccgcgagctggtcgccctgggtgtgcgcagcgcccaggggtacctgtggaag
cgcccggtcgcggccgccgagctcgggccctggctggtggagcggacccagcgcacgggg
cggtga
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