Rhodococcus antarcticus: RHODO2019_16740
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Entry
RHODO2019_16740 CDS
T09186
Name
(GenBank) DEAD/DEAH box helicase
Organism
rant
Rhodococcus antarcticus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
UZJ24733
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All DBs
Position
3429041..3432103
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AA seq
1020 aa
AA seq
DB search
MSDGVVTVHGLWSRGTGLLLWFERAGAGAGAGAGAAGLHPDAVADPATLPGPPRRWEGRL
ESALTPSALRRRPELLLPSAGGVPVTTGATELRSWRVPATALAPPAAAELLHEVAHLHST
SEQGWVLSPELLFLGEVASGVARWVYSGRVVPSVRGIDDEHWARWVLVDDGPVRTWRTQL
AAALPPVLRAEVVQGGAVPAAEIVDDLLDELTDAVVRGTLRLSESQARGAFHPLVRSLET
GDPLEAFGASTTRLRTSLAEWASSSSLGAPEVLFRLLEPVEGDPVAEPVEGDPVAEPVAP
DSTWILETCLRTEDSAPVPVRSLPRSPETAGLALTALGRAMTAWPRLRRITPDVREHVVA
LSTADTVDLVTRGAQQLRAAGIEVLLPRAWTRLDPSVALKVSSPAAAAAVTSGSVGMAQL
VDYEWRLALGEVVLTPKELAALATSKAELVRLRGQWVRLDGAAVGRAARYVAGHSARGAT
LGQVLSELTSTDVPPVPVQEVEATGWLGDLLAAQPGSTLTTVGSPPGLRALLRPYQQRGL
DWLAFMSRLGLGVVLADDMGLGKTVQLLALLLHERRDAAAPGPTLLVCPMSVVGNWQREA
AQFAPDLRVLVHHGVGRLAGEALAAAAPAHDLVLTTYQTLARDKDSLALVGWDRVALDEA
QHVKNAATTQARAVRAMRARHRVALTGTPVENRLEELRAVLDFVNPGMLGSAQSFRARFA
VPIEREHDEGAVTRLRTATRPFLLRRLKTDPTVITDLPAKNEMTVLANLTAEQAALYKAV
VDEMLAKIAEAREQGQEMARRALVLTTLTRLKQVCNHPAHFLADGSAVLRRGAHRSGKLD
LVEDVLTSVLADGEKALLFTQFRQFGDLVGPWFAERFGVEVPFLHGGVSKGRRDAMVERF
QGTGSAAGDDGPPLMLLSLKAGGTGLNLTAANHVVHLDRWWNPAVENQATDRAFRIGQRK
DVAVRKLVCVGTVEERIDNLISSKRELADLAVGSGEGWVTELGTDDLRELLTLGADAVGE
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacggggtggtgacggtgcacgggctgtggtcccgtggcaccggcctgctgctg
tggttcgagcgggccggggccggggccggggccggggccggggcagcgggtctgcacccg
gacgcggtggcggacccggcgacgctgcccgggcccccgcgccgctgggagggacggctg
gagagcgcgctgaccccgtcggccctgcggcggcggcccgagctgctgctgcccagcgcg
ggaggggtgcccgtcaccaccggggccaccgagctccggtcctggcgcgtgccggccacc
gcgctcgccccacccgcggcggccgagctgctgcacgaggtggcgcacctgcacagcacc
agcgagcaggggtgggtgctctcgccggagctgctgttcctcggcgaggtggcctccggc
gtcgcccgctgggtctactcggggcgcgtggtgccctccgtgcgcggcatcgacgacgag
cactgggcccggtgggtcctggtcgacgacgggccggtgcgcacctggcgcacccagctg
gccgccgccctgccgcccgtgctccgcgccgaggtggtgcagggcggtgcggtccccgct
gccgagatcgtggacgacctgctcgacgagctcaccgacgcggtggtccgcgggaccctc
cggctcagcgagtcccaggcccgcggcgccttccacccgctggtgcgctcgctggagacg
ggggacccgctggaggcgttcggggccagcaccacgaggctgcgcacgagcctggcggag
tgggcgtcgagctcctcgctgggcgcgccggaggtgctgttccggctgctggagcccgtc
gagggcgaccctgtcgctgagcccgtcgagggcgaccctgtcgcggagcccgtggcgccc
gactccacctggatcctggagacctgcctgcgcacggaggactcggccccggtgcccgtg
cgctcgctgccccgctcccccgagacggcgggtctcgccctgaccgcgctgggacgggcc
atgacggcgtggccgcggctgcggcggatcacccccgacgtccgcgagcacgtcgtcgcg
ctgagcacggccgacacggtggacctcgtcacgcggggcgcgcagcagctgcgggcggcg
ggcatcgaggtgctgctgccgcgcgcctggacgcggctggacccgtcggtggcgctgaag
gttagctcgcccgcggccgcggcggcggtcacctcggggtcggtgggcatggcccagctg
gtggactacgagtggcgactggccctgggcgaggtggtgctgaccccgaaggagctcgcg
gcgctggcgacgtccaaggccgagctggtgcggctgcgcgggcagtgggtgcgcctggac
ggggccgcggtgggccgggccgcccggtacgtggccggtcacagcgctcgcggagccacc
ctcggtcaggtgctcagcgagctgaccagcaccgacgtccctcccgtgcccgtgcaggag
gtggaggccaccggctggctcggtgacctgctcgccgcccagcccggctccaccctgacc
accgtgggctccccgcccggcctgcgcgcgctgctgcggccctaccagcagcgcgggctc
gactggctggcgttcatgagccgcctgggcctcggagtggtgctggccgacgacatgggt
ctgggcaagaccgtccagctgctggccctgctgctgcacgagcgccgtgacgcggccgcg
ccggggccgaccctgctggtctgcccgatgagcgttgtgggtaactggcagcgcgaggct
gcgcagttcgcccccgacctgcgggtgctcgtccaccacggggtgggccggctcgcgggc
gaggcgctcgcggctgcggcgcccgcgcacgacctggtgctgaccacctaccagaccctc
gcgcgcgacaaggactccctggccctggtcggctgggaccgggttgccctggacgaggca
cagcacgtgaagaacgccgccaccacccaggcccgggccgtccgggcgatgcgggcgcgg
caccgggtggcgctgaccggcaccccggtggagaaccggctcgaggagcttcgtgccgtg
ctcgacttcgtcaacccggggatgctcgggtcggcgcagagcttccgggcccggttcgcg
gtgcccatcgagcgtgagcacgacgagggtgccgtcacgcggctgcgcaccgccacccgt
ccgttcctgctgcgccggctcaagaccgaccccaccgtcatcaccgacctgcccgccaag
aacgagatgacggtgctggccaacctcaccgccgagcaggccgcgctgtacaaggccgtc
gtcgacgagatgctggccaagatcgccgaggccagggagcagggacaggagatggcccgc
cgagccctggtgctcaccacgctgacccggctcaagcaggtgtgcaaccaccccgcgcac
ttcctggccgacggctcggccgtgctccgccggggtgcgcaccgctccggcaagctcgac
ctggtggaggacgtgctgacctccgtgctcgccgacggggagaaggcgctgctgttcacc
cagttccgccagttcggtgacctcgtcggtccgtggttcgcggagcgcttcggcgtggag
gtgccgttcctgcacgggggggtgtccaaggggcggcgcgatgcgatggtcgagcggttc
cagggcaccggttcggccgccggcgacgacgggccgccgctgatgctgctgtccctcaag
gccggcggcacggggctgaacctgacggcggccaaccacgtcgtccacctggaccgctgg
tggaacccggccgtggagaaccaggcgaccgaccgcgcgttccggatcggtcagcgcaag
gacgtggccgtccgcaagctggtgtgcgtgggcacggtggaggagcgcatcgacaacctc
atcagcagcaagcgcgagctggccgacctggcggtgggctccggcgagggctgggtgacc
gagctcggcaccgacgacctgcgcgagctgttgacgctgggcgcggacgcggtgggcgag
tga
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