Rhodococcus antarcticus: RHODO2019_18605
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Entry
RHODO2019_18605 CDS
T09186
Name
(GenBank) HU family DNA-binding protein
KO
K05787
DNA-binding protein HU-alpha
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rant03032
]
RHODO2019_18605
03036 Chromosome and associated proteins [BR:
rant03036
]
RHODO2019_18605
03400 DNA repair and recombination proteins [BR:
rant03400
]
RHODO2019_18605
DNA replication proteins [BR:
rant03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RHODO2019_18605
Chromosome and associated proteins [BR:
rant03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RHODO2019_18605
DNA repair and recombination proteins [BR:
rant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RHODO2019_18605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HC2
HU-CCDC81_euk_2
Shikimate_dh_N
Motif
Other DBs
NCBI-ProteinID:
UZJ27004
LinkDB
All DBs
Position
unnamed2:21638..22066
Genome browser
AA seq
142 aa
AA seq
DB search
MNRSQLINAVAAATDLPPAQVEATLSATLSEVRGAVASGDKVQLLGFGTFEPRERAARTA
RNPATGAQLQLAATRVVGFKVGAPFKQEVAASATTKKATAKKTPAAKTAAKQTPTKASAA
TTKTAAKKATAKKAPAKKSAKK
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttcgcagctgatcaacgccgtagccgccgcgaccgacctgccccccgctcag
gtcgaggccaccctcagcgccaccctttccgaggttcggggcgcggtggcctccggtgac
aaggtgcagctgctgggcttcggcaccttcgagccccgtgagcgtgcagcgcgcaccgcc
cgcaaccccgcaaccggggcgcagctgcagctggccgcgacccgggtggtgggcttcaag
gtcggtgcccccttcaagcaggaggtcgccgccagcgccaccaccaagaaggcgacggcg
aagaagacccccgccgcgaagacagcggccaagcagaccccgaccaaggccagcgccgca
accacgaagacagcggccaagaaggccacggcgaagaaggcgccggcgaagaagtccgcc
aagaagtag
DBGET
integrated database retrieval system
