Raoultella sp. X13: DSD31_01265
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Entry
DSD31_01265 CDS
T05540
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DSD31_01265
Enzymes [BR:
rao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DSD31_01265
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
DUF3975
Motif
Other DBs
NCBI-ProteinID:
AXC28173
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All DBs
Position
270358..272367
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AA seq
669 aa
AA seq
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MRVSRSLTIKQMAMVAGVSMAFVLVFCSILLFHFVQQSRFITATQLESIARSVREPLSAA
ILKADIPEAEAILGRIQPAGIVSRADVVLPNQFQALRMRFIPERPVPVMVTRVFELPVQI
SLPIYSLERPANPQPIAYLVLQADSWQTYKFVMSVLSTLVTAYFLLVLILTVAITWCINR
LIVRPLRKLARELNDVAPQDRLGHQLTLPRLHHDDEIGLLVRSYNRNQQTLLRQHDELTL
QSTRFPVSELPNKAFLMALLEQTVARPQSSALLVIACETLQDTAGVLKETQREILLLTLV
EKLRGIIPPRMVLAQISGYDFAILAHGMSEPWHAATLSKQVLTVINERLPLQGIQLRPCA
SVGIAMFNGELSAEQLYRRAFSAAIAARHKGKNQIEFFDPAQMEKAQRRLMEEHDILTAL
DNHQFAIWLQPQVDAASGEVCGAEVLLRQRQPDGSWSLPADLIERIEACGLMVPVGYWVM
EEACRQLAAWQSLGIMLPLSVNVSLLQLLHHDRGTEMLTLLDRYRIAPGTLVLEITESRH
LDDPQTVVSLLRPLREAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKAFIDMLPED
TSMVPAIIQLARGLNLRIVAEGVEKEAQYHWLQAAGVDVVQGFLFGCALSQEAFMTQFLR
GKNEGGASL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagccgctcacttacaattaaacagatggcgatggtcgcgggcgtgtccatg
gcgtttgtattggtattttgttctattttgctgtttcactttgtgcaacagagtcgcttc
attacggccacgcaattagaaagtatcgctcgttccgttcgcgaacctctgtcggcggct
atcctgaaagcggatatccccgaggcggaagccattctggggcgtatccagcctgctggt
attgtcagccgggcggatgtggtgttgcccaatcaatttcaggcgctgcggatgcggttt
atcccggagcgtccggtaccggtgatggtgacccgcgttttcgaactcccggtacagatc
tccctgccgatttactccctggagaggccagccaacccgcagccgatagcctatctggtg
ctgcaggccgactcctggcagacctacaaattcgtcatgagcgtactttctacgttagtg
actgcttacttcttgctggtgcttattctgacggtggctatcacatggtgtatcaaccgt
ctgatcgtccgtccgctgcgtaagctggctcgtgagctcaatgatgttgcgccgcaggac
cggctcgggcaccagctgacgctgccgcgtctgcaccatgatgatgaaatcggcctgctg
gtgcgcagctataaccgaaaccagcagaccctgctgcgtcagcacgatgagctgacctta
cagtccacccgcttcccggtatccgagctgccgaataaggcctttttgatggccctgctg
gagcagaccgtcgcccggccgcaaagctcagctttgctggttatcgcctgcgaaacattg
caggacaccgcgggagtactgaaagagacccagcgcgagatcctgctgctgacactggtg
gagaagctgcgggggatcatcccgccgcggatggtgctggctcagattagcggctatgac
ttcgccattctggcccacggaatgagcgagccgtggcacgcggcgacattaagtaagcaa
gtgctcactgtcataaatgaacggctgccgctgcagggtattcaactgcgcccctgcgcc
agcgtgggtattgcgatgtttaacggcgaactgagcgcggaacagctctatcgtcgggca
ttttctgccgctatcgccgcgcggcataaaggtaaaaaccagattgaattcttcgatccg
gcccagatggaaaaagcccagcgtcggctgatggaagaacacgacatccttaccgcgctg
gataatcatcagttcgctatctggctccagccacaggttgatgccgccagcggtgaggtt
tgcggagcggaagtgctgctgcgacaacgccagcccgacggaagctggtcgctccctgcg
gatctgattgaacgcattgaagcctgtgggctgatggtgccggtgggttactgggtgatg
gaagaagcctgccgccagctggccgcatggcaaagcctgggcatcatgttgccgctgtcg
gtgaacgtttcgctgctgcagctgctgcaccacgatcgcggtaccgagatgctgacatta
ctggatcgctatcgcatcgcgcctgggacgctggtgctggagattacggaaagccgtcat
ctggacgacccgcagacggtggtgtcgctgctgcgtccgctgcgtgaggcgggcgtgcgg
attgcgctggatgatttcgggatgggctacgccgggctgcgtcagctccagcatatgaaa
tcgctgccggtcgatatcctgaaaatcgataaagcctttatcgatatgttgcccgaggat
accagcatggttccggcgattatccagctggcacgcggccttaatctgcgcatcgtggcg
gaaggagttgaaaaagaagcgcagtatcactggttgcaggcggccggtgtggatgttgtt
caggggttcctgtttggttgcgctttgtcgcaggaggcctttatgacgcagttcttgcgc
ggcaagaatgaagggggtgcaagcttgtaa
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